Protein–RNA interactions for Protein: O88627

Slc28a2, Sodium/nucleoside cotransporter 2, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a2O88627 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Slc28a2O88627 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Slc28a2O88627 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Slc28a2O88627 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.16□□□□□ -0.3
Slc28a2O88627 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc28a2O88627 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc28a2O88627 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc28a2O88627 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc28a2O88627 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc28a2O88627 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc28a2O88627 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Slc28a2O88627 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc28a2O88627 Gm25990-201ENSMUST00000102440 86 ntBASIC13.15□□□□□ -0.3
Slc28a2O88627 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Slc28a2O88627 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.15□□□□□ -0.3
Slc28a2O88627 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Slc28a2O88627 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.15□□□□□ -0.3
Slc28a2O88627 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.15□□□□□ -0.3
Slc28a2O88627 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc28a2O88627 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Slc28a2O88627 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc28a2O88627 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Slc28a2O88627 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Slc28a2O88627 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Slc28a2O88627 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc28a2O88627 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Slc28a2O88627 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.15□□□□□ -0.31
Slc28a2O88627 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.15□□□□□ -0.31
Slc28a2O88627 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.14□□□□□ -0.31
Slc28a2O88627 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc28a2O88627 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc28a2O88627 Gm37500-201ENSMUST00000192059 1443 ntBASIC13.14□□□□□ -0.31
Slc28a2O88627 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc28a2O88627 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc28a2O88627 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc28a2O88627 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Slc28a2O88627 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Slc28a2O88627 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC13.14□□□□□ -0.31
Slc28a2O88627 Gm6089-201ENSMUST00000197666 938 ntBASIC13.14□□□□□ -0.31
Slc28a2O88627 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC13.14□□□□□ -0.31
Slc28a2O88627 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC13.14□□□□□ -0.31
Slc28a2O88627 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Slc28a2O88627 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc28a2O88627 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Slc28a2O88627 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC13.14□□□□□ -0.31
Slc28a2O88627 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Slc28a2O88627 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc28a2O88627 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Slc28a2O88627 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Slc28a2O88627 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc28a2O88627 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc28a2O88627 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc28a2O88627 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc28a2O88627 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc28a2O88627 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.14□□□□□ -0.31
Slc28a2O88627 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc28a2O88627 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc28a2O88627 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc28a2O88627 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc28a2O88627 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.14□□□□□ -0.31
Slc28a2O88627 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc28a2O88627 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc28a2O88627 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc28a2O88627 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc28a2O88627 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc28a2O88627 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc28a2O88627 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Slc28a2O88627 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc28a2O88627 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc28a2O88627 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
Slc28a2O88627 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc28a2O88627 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc28a2O88627 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.13□□□□□ -0.31
Slc28a2O88627 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Slc28a2O88627 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc28a2O88627 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Slc28a2O88627 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Slc28a2O88627 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Slc28a2O88627 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC13.13□□□□□ -0.31
Slc28a2O88627 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
Slc28a2O88627 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc28a2O88627 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Slc28a2O88627 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Slc28a2O88627 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc28a2O88627 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc28a2O88627 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Slc28a2O88627 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc28a2O88627 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Slc28a2O88627 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Slc28a2O88627 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc28a2O88627 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc28a2O88627 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc28a2O88627 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc28a2O88627 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc28a2O88627 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Slc28a2O88627 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.13□□□□□ -0.31
Slc28a2O88627 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
Slc28a2O88627 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Slc28a2O88627 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc28a2O88627 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms