Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vti1bO88384 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vti1bO88384 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vti1bO88384 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Vti1bO88384 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vti1bO88384 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vti1bO88384 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Vti1bO88384 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Vti1bO88384 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Vti1bO88384 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vti1bO88384 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vti1bO88384 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vti1bO88384 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vti1bO88384 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vti1bO88384 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vti1bO88384 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.09□□□□□ -0.15
Vti1bO88384 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vti1bO88384 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vti1bO88384 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vti1bO88384 Gm7222-201ENSMUST00000117512 906 ntBASIC14.09□□□□□ -0.15
Vti1bO88384 Gm15173-201ENSMUST00000122049 433 ntBASIC14.09□□□□□ -0.15
Vti1bO88384 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vti1bO88384 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Vti1bO88384 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
Vti1bO88384 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
Vti1bO88384 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vti1bO88384 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.09□□□□□ -0.15
Vti1bO88384 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.09□□□□□ -0.15
Vti1bO88384 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vti1bO88384 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.09□□□□□ -0.15
Vti1bO88384 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vti1bO88384 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.09□□□□□ -0.15
Vti1bO88384 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vti1bO88384 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vti1bO88384 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vti1bO88384 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vti1bO88384 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.09□□□□□ -0.15
Vti1bO88384 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vti1bO88384 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Vti1bO88384 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vti1bO88384 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vti1bO88384 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Vti1bO88384 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.08□□□□□ -0.15
Vti1bO88384 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Vti1bO88384 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vti1bO88384 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vti1bO88384 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vti1bO88384 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vti1bO88384 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.08□□□□□ -0.16
Vti1bO88384 Gm6550-201ENSMUST00000187574 993 ntBASIC14.08□□□□□ -0.16
Vti1bO88384 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vti1bO88384 Gm7461-201ENSMUST00000058918 827 ntBASIC14.08□□□□□ -0.16
Vti1bO88384 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Vti1bO88384 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vti1bO88384 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vti1bO88384 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vti1bO88384 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vti1bO88384 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vti1bO88384 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vti1bO88384 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Vti1bO88384 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vti1bO88384 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Vti1bO88384 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Vti1bO88384 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.07□□□□□ -0.16
Vti1bO88384 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vti1bO88384 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vti1bO88384 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vti1bO88384 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vti1bO88384 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.07□□□□□ -0.16
Vti1bO88384 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vti1bO88384 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vti1bO88384 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.07□□□□□ -0.16
Vti1bO88384 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vti1bO88384 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Vti1bO88384 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vti1bO88384 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.07□□□□□ -0.16
Vti1bO88384 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.07□□□□□ -0.16
Vti1bO88384 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.07□□□□□ -0.16
Vti1bO88384 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vti1bO88384 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.07□□□□□ -0.16
Vti1bO88384 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.07□□□□□ -0.16
Vti1bO88384 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.07□□□□□ -0.16
Vti1bO88384 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vti1bO88384 Mzt1-203ENSMUST00000227948 952 ntBASIC14.07□□□□□ -0.16
Vti1bO88384 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vti1bO88384 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vti1bO88384 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vti1bO88384 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vti1bO88384 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vti1bO88384 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vti1bO88384 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vti1bO88384 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vti1bO88384 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vti1bO88384 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vti1bO88384 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vti1bO88384 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vti1bO88384 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vti1bO88384 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vti1bO88384 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vti1bO88384 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms