Protein–RNA interactions for Protein: O88271

Cfdp1, Craniofacial development protein 1, mousemouse

Known RBP Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfdp1O88271 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Cfdp1O88271 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cfdp1O88271 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cfdp1O88271 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cfdp1O88271 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cfdp1O88271 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cfdp1O88271 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cfdp1O88271 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
Cfdp1O88271 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cfdp1O88271 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cfdp1O88271 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cfdp1O88271 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cfdp1O88271 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cfdp1O88271 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cfdp1O88271 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cfdp1O88271 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cfdp1O88271 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
Cfdp1O88271 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cfdp1O88271 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cfdp1O88271 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cfdp1O88271 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cfdp1O88271 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cfdp1O88271 Gm15920-201ENSMUST00000118998 402 ntBASIC18.39■□□□□ 0.53
Cfdp1O88271 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC18.39■□□□□ 0.53
Cfdp1O88271 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cfdp1O88271 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC18.39■□□□□ 0.53
Cfdp1O88271 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Cfdp1O88271 Gm5479-201ENSMUST00000160578 435 ntBASIC18.39■□□□□ 0.53
Cfdp1O88271 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC18.39■□□□□ 0.53
Cfdp1O88271 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC18.39■□□□□ 0.53
Cfdp1O88271 Mir6956-201ENSMUST00000183598 62 ntBASIC18.39■□□□□ 0.53
Cfdp1O88271 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cfdp1O88271 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC18.39■□□□□ 0.53
Cfdp1O88271 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC18.39■□□□□ 0.53
Cfdp1O88271 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cfdp1O88271 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cfdp1O88271 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cfdp1O88271 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cfdp1O88271 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Cfdp1O88271 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cfdp1O88271 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC18.39■□□□□ 0.53
Cfdp1O88271 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Cfdp1O88271 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cfdp1O88271 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cfdp1O88271 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cfdp1O88271 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cfdp1O88271 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cfdp1O88271 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cfdp1O88271 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cfdp1O88271 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cfdp1O88271 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cfdp1O88271 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cfdp1O88271 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cfdp1O88271 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cfdp1O88271 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cfdp1O88271 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cfdp1O88271 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC18.38■□□□□ 0.53
Cfdp1O88271 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC18.38■□□□□ 0.53
Cfdp1O88271 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC18.38■□□□□ 0.53
Cfdp1O88271 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cfdp1O88271 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cfdp1O88271 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cfdp1O88271 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cfdp1O88271 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cfdp1O88271 Gm37305-201ENSMUST00000195714 4279 ntBASIC18.38■□□□□ 0.53
Cfdp1O88271 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Cfdp1O88271 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cfdp1O88271 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cfdp1O88271 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cfdp1O88271 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cfdp1O88271 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cfdp1O88271 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cfdp1O88271 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cfdp1O88271 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cfdp1O88271 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cfdp1O88271 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cfdp1O88271 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cfdp1O88271 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC18.37■□□□□ 0.53
Cfdp1O88271 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
Cfdp1O88271 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cfdp1O88271 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Cfdp1O88271 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC18.37■□□□□ 0.53
Cfdp1O88271 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cfdp1O88271 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cfdp1O88271 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cfdp1O88271 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC18.37■□□□□ 0.53
Cfdp1O88271 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Cfdp1O88271 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Cfdp1O88271 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC18.37■□□□□ 0.53
Cfdp1O88271 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cfdp1O88271 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cfdp1O88271 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cfdp1O88271 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cfdp1O88271 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cfdp1O88271 Gm8749-201ENSMUST00000117737 331 ntBASIC18.36■□□□□ 0.53
Cfdp1O88271 Gm6944-201ENSMUST00000182449 1006 ntBASIC18.36■□□□□ 0.53
Cfdp1O88271 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cfdp1O88271 Ighv8-7-201ENSMUST00000194349 297 ntBASIC18.36■□□□□ 0.53
Cfdp1O88271 AC124732.2-201ENSMUST00000221977 316 ntBASIC18.36■□□□□ 0.53
Cfdp1O88271 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms