Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Stx1aO35526 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Stx1aO35526 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Stx1aO35526 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Stx1aO35526 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Stx1aO35526 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Stx1aO35526 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Stx1aO35526 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Stx1aO35526 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Stx1aO35526 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Stx1aO35526 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Stx1aO35526 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC16.61■□□□□ 0.25
Stx1aO35526 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Stx1aO35526 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Stx1aO35526 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC16.6■□□□□ 0.25
Stx1aO35526 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Stx1aO35526 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Stx1aO35526 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Stx1aO35526 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Stx1aO35526 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC16.6■□□□□ 0.25
Stx1aO35526 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Stx1aO35526 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Stx1aO35526 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Stx1aO35526 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Stx1aO35526 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Stx1aO35526 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.6■□□□□ 0.25
Stx1aO35526 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Stx1aO35526 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.6■□□□□ 0.25
Stx1aO35526 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.6■□□□□ 0.25
Stx1aO35526 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.6■□□□□ 0.25
Stx1aO35526 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Stx1aO35526 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Stx1aO35526 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Stx1aO35526 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC16.6■□□□□ 0.25
Stx1aO35526 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC16.6■□□□□ 0.25
Stx1aO35526 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Stx1aO35526 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Stx1aO35526 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Stx1aO35526 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Stx1aO35526 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Stx1aO35526 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Stx1aO35526 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Stx1aO35526 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Stx1aO35526 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Stx1aO35526 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.59■□□□□ 0.25
Stx1aO35526 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Stx1aO35526 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Stx1aO35526 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Stx1aO35526 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
Stx1aO35526 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Stx1aO35526 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Stx1aO35526 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Stx1aO35526 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
Stx1aO35526 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Stx1aO35526 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.59■□□□□ 0.25
Stx1aO35526 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.59■□□□□ 0.25
Stx1aO35526 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Stx1aO35526 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Stx1aO35526 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC16.59■□□□□ 0.25
Stx1aO35526 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Stx1aO35526 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Stx1aO35526 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Stx1aO35526 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Stx1aO35526 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Stx1aO35526 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Stx1aO35526 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Stx1aO35526 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
Stx1aO35526 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Stx1aO35526 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Stx1aO35526 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.25
Stx1aO35526 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC16.58■□□□□ 0.25
Stx1aO35526 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Stx1aO35526 Gm28182-201ENSMUST00000188354 2477 ntBASIC16.58■□□□□ 0.25
Stx1aO35526 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Stx1aO35526 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC16.58■□□□□ 0.25
Stx1aO35526 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Stx1aO35526 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Stx1aO35526 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Stx1aO35526 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Stx1aO35526 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Stx1aO35526 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.58■□□□□ 0.24
Stx1aO35526 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.58■□□□□ 0.24
Stx1aO35526 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.58■□□□□ 0.24
Stx1aO35526 Gm4535-201ENSMUST00000182274 558 ntBASIC16.58■□□□□ 0.24
Stx1aO35526 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.58■□□□□ 0.24
Stx1aO35526 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.58■□□□□ 0.24
Stx1aO35526 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Stx1aO35526 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Stx1aO35526 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Stx1aO35526 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Stx1aO35526 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Stx1aO35526 Gm10355-201ENSMUST00000097146 517 ntBASIC16.58■□□□□ 0.24
Stx1aO35526 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Stx1aO35526 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC16.58■□□□□ 0.24
Stx1aO35526 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Stx1aO35526 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Stx1aO35526 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Stx1aO35526 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Stx1aO35526 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC16.58■□□□□ 0.24
Stx1aO35526 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms