Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Capn1O35350 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Capn1O35350 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.69□□□□□ -0.22
Capn1O35350 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Capn1O35350 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Capn1O35350 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Capn1O35350 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Capn1O35350 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Capn1O35350 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Capn1O35350 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Capn1O35350 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Capn1O35350 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Capn1O35350 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Capn1O35350 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Capn1O35350 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Capn1O35350 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.68□□□□□ -0.22
Capn1O35350 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Capn1O35350 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Capn1O35350 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.68□□□□□ -0.22
Capn1O35350 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Capn1O35350 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.68□□□□□ -0.22
Capn1O35350 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Capn1O35350 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Capn1O35350 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.68□□□□□ -0.22
Capn1O35350 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Capn1O35350 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.68□□□□□ -0.22
Capn1O35350 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Capn1O35350 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Capn1O35350 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Capn1O35350 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.68□□□□□ -0.22
Capn1O35350 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Capn1O35350 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Capn1O35350 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Capn1O35350 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Capn1O35350 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Capn1O35350 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Capn1O35350 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Capn1O35350 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Capn1O35350 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Capn1O35350 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Capn1O35350 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC13.67□□□□□ -0.22
Capn1O35350 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Capn1O35350 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.67□□□□□ -0.22
Capn1O35350 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Capn1O35350 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Capn1O35350 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Capn1O35350 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Capn1O35350 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Capn1O35350 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Capn1O35350 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Capn1O35350 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Capn1O35350 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.67□□□□□ -0.22
Capn1O35350 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Capn1O35350 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Capn1O35350 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Capn1O35350 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Capn1O35350 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Capn1O35350 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.67□□□□□ -0.22
Capn1O35350 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Capn1O35350 Gm16198-201ENSMUST00000118766 670 ntBASIC13.67□□□□□ -0.22
Capn1O35350 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.67□□□□□ -0.22
Capn1O35350 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.67□□□□□ -0.22
Capn1O35350 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Capn1O35350 Gm5312-201ENSMUST00000203728 547 ntBASIC13.67□□□□□ -0.22
Capn1O35350 Gm44872-201ENSMUST00000207864 420 ntBASIC13.67□□□□□ -0.22
Capn1O35350 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.67□□□□□ -0.22
Capn1O35350 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.67□□□□□ -0.22
Capn1O35350 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Capn1O35350 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Capn1O35350 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Capn1O35350 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Capn1O35350 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.67□□□□□ -0.22
Capn1O35350 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.67□□□□□ -0.22
Capn1O35350 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Capn1O35350 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC13.67□□□□□ -0.22
Capn1O35350 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Capn1O35350 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Capn1O35350 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Capn1O35350 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Capn1O35350 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Capn1O35350 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Capn1O35350 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Capn1O35350 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Capn1O35350 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Capn1O35350 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Capn1O35350 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Capn1O35350 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Capn1O35350 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Capn1O35350 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Capn1O35350 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Capn1O35350 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Capn1O35350 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Capn1O35350 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Capn1O35350 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Capn1O35350 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Capn1O35350 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Capn1O35350 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.66□□□□□ -0.22
Capn1O35350 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Capn1O35350 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.66□□□□□ -0.22
Capn1O35350 Gm10499-201ENSMUST00000174094 934 ntBASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms