Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ebf3O08791 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ebf3O08791 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ebf3O08791 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC15.35■□□□□ 0.05
Ebf3O08791 Gm16026-204ENSMUST00000162652 683 ntBASIC15.35■□□□□ 0.05
Ebf3O08791 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ebf3O08791 Gm37277-201ENSMUST00000194052 1111 ntBASIC15.35■□□□□ 0.05
Ebf3O08791 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ebf3O08791 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Ebf3O08791 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Ebf3O08791 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ebf3O08791 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ebf3O08791 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.34■□□□□ 0.05
Ebf3O08791 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ebf3O08791 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ebf3O08791 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ebf3O08791 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.34■□□□□ 0.05
Ebf3O08791 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Ebf3O08791 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
Ebf3O08791 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ebf3O08791 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ebf3O08791 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ebf3O08791 Gm11543-201ENSMUST00000120758 370 ntBASIC15.34■□□□□ 0.05
Ebf3O08791 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.34■□□□□ 0.05
Ebf3O08791 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ebf3O08791 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ebf3O08791 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC15.34■□□□□ 0.05
Ebf3O08791 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC15.34■□□□□ 0.05
Ebf3O08791 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ebf3O08791 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC15.34■□□□□ 0.05
Ebf3O08791 CT025535.1-201ENSMUST00000227172 491 ntBASIC15.34■□□□□ 0.05
Ebf3O08791 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ebf3O08791 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ebf3O08791 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ebf3O08791 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ebf3O08791 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ebf3O08791 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ebf3O08791 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ebf3O08791 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ebf3O08791 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ebf3O08791 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ebf3O08791 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
Ebf3O08791 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ebf3O08791 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ebf3O08791 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ebf3O08791 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ebf3O08791 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ebf3O08791 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
Ebf3O08791 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Ebf3O08791 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ebf3O08791 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ebf3O08791 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ebf3O08791 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ebf3O08791 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.33■□□□□ 0.05
Ebf3O08791 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ebf3O08791 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ebf3O08791 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ebf3O08791 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ebf3O08791 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ebf3O08791 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ebf3O08791 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15.33■□□□□ 0.04
Ebf3O08791 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC15.33■□□□□ 0.04
Ebf3O08791 Gm2810-201ENSMUST00000118681 990 ntBASIC15.33■□□□□ 0.04
Ebf3O08791 Gm12428-201ENSMUST00000119844 727 ntBASIC15.33■□□□□ 0.04
Ebf3O08791 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ebf3O08791 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ebf3O08791 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ebf3O08791 CT010506.4-201ENSMUST00000225457 351 ntBASIC15.33■□□□□ 0.04
Ebf3O08791 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC15.33■□□□□ 0.04
Ebf3O08791 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ebf3O08791 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ebf3O08791 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ebf3O08791 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ebf3O08791 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ebf3O08791 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ebf3O08791 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ebf3O08791 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Ebf3O08791 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ebf3O08791 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ebf3O08791 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ebf3O08791 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ebf3O08791 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ebf3O08791 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ebf3O08791 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ebf3O08791 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC15.32■□□□□ 0.04
Ebf3O08791 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.32■□□□□ 0.04
Ebf3O08791 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC15.32■□□□□ 0.04
Ebf3O08791 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC15.32■□□□□ 0.04
Ebf3O08791 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC15.32■□□□□ 0.04
Ebf3O08791 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC15.32■□□□□ 0.04
Ebf3O08791 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC15.32■□□□□ 0.04
Ebf3O08791 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC15.32■□□□□ 0.04
Ebf3O08791 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ebf3O08791 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ebf3O08791 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ebf3O08791 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Ebf3O08791 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ebf3O08791 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ebf3O08791 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ebf3O08791 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms