Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NpcdF8VQB8 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NpcdF8VQB8 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NpcdF8VQB8 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.71■□□□□ 0.43
NpcdF8VQB8 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
NpcdF8VQB8 AC114008.2-201ENSMUST00000227699 1347 ntBASIC17.71■□□□□ 0.42
NpcdF8VQB8 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
NpcdF8VQB8 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
NpcdF8VQB8 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
NpcdF8VQB8 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.7■□□□□ 0.42
NpcdF8VQB8 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
NpcdF8VQB8 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NpcdF8VQB8 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NpcdF8VQB8 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
NpcdF8VQB8 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
NpcdF8VQB8 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NpcdF8VQB8 Gm4984-201ENSMUST00000115987 360 ntBASIC17.7■□□□□ 0.42
NpcdF8VQB8 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC17.7■□□□□ 0.42
NpcdF8VQB8 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC17.7■□□□□ 0.42
NpcdF8VQB8 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
NpcdF8VQB8 Gm10766-202ENSMUST00000194123 606 ntBASIC17.7■□□□□ 0.42
NpcdF8VQB8 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC17.7■□□□□ 0.42
NpcdF8VQB8 Gm7556-201ENSMUST00000201178 1084 ntBASIC17.7■□□□□ 0.42
NpcdF8VQB8 Gm9797-201ENSMUST00000052902 613 ntBASIC17.7■□□□□ 0.42
NpcdF8VQB8 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
NpcdF8VQB8 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NpcdF8VQB8 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NpcdF8VQB8 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
NpcdF8VQB8 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NpcdF8VQB8 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
NpcdF8VQB8 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
NpcdF8VQB8 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.7■□□□□ 0.42
NpcdF8VQB8 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NpcdF8VQB8 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NpcdF8VQB8 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NpcdF8VQB8 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
NpcdF8VQB8 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.7■□□□□ 0.42
NpcdF8VQB8 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NpcdF8VQB8 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NpcdF8VQB8 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
NpcdF8VQB8 AC131068.2-201ENSMUST00000226175 1453 ntBASIC17.69■□□□□ 0.42
NpcdF8VQB8 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
NpcdF8VQB8 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NpcdF8VQB8 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
NpcdF8VQB8 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NpcdF8VQB8 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NpcdF8VQB8 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NpcdF8VQB8 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC17.69■□□□□ 0.42
NpcdF8VQB8 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NpcdF8VQB8 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC17.69■□□□□ 0.42
NpcdF8VQB8 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC17.69■□□□□ 0.42
NpcdF8VQB8 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC17.69■□□□□ 0.42
NpcdF8VQB8 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NpcdF8VQB8 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NpcdF8VQB8 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NpcdF8VQB8 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NpcdF8VQB8 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NpcdF8VQB8 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
NpcdF8VQB8 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NpcdF8VQB8 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
NpcdF8VQB8 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NpcdF8VQB8 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
NpcdF8VQB8 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NpcdF8VQB8 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
NpcdF8VQB8 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NpcdF8VQB8 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
NpcdF8VQB8 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NpcdF8VQB8 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
NpcdF8VQB8 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NpcdF8VQB8 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
NpcdF8VQB8 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NpcdF8VQB8 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC17.68■□□□□ 0.42
NpcdF8VQB8 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NpcdF8VQB8 Gm7390-201ENSMUST00000212452 1216 ntBASIC17.68■□□□□ 0.42
NpcdF8VQB8 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
NpcdF8VQB8 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NpcdF8VQB8 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NpcdF8VQB8 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
NpcdF8VQB8 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NpcdF8VQB8 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NpcdF8VQB8 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
NpcdF8VQB8 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
NpcdF8VQB8 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NpcdF8VQB8 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NpcdF8VQB8 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NpcdF8VQB8 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NpcdF8VQB8 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NpcdF8VQB8 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NpcdF8VQB8 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.67■□□□□ 0.42
NpcdF8VQB8 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
NpcdF8VQB8 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC17.67■□□□□ 0.42
NpcdF8VQB8 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NpcdF8VQB8 CT030657.3-201ENSMUST00000222707 1200 ntBASIC17.67■□□□□ 0.42
NpcdF8VQB8 Dupd1-202ENSMUST00000224735 548 ntBASIC17.67■□□□□ 0.42
NpcdF8VQB8 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NpcdF8VQB8 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NpcdF8VQB8 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
NpcdF8VQB8 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NpcdF8VQB8 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NpcdF8VQB8 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms