Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ube4aE9Q735 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC17.65■□□□□ 0.42
Ube4aE9Q735 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Ube4aE9Q735 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC17.65■□□□□ 0.42
Ube4aE9Q735 Gm6218-201ENSMUST00000219812 628 ntBASIC17.65■□□□□ 0.42
Ube4aE9Q735 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ube4aE9Q735 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC17.65■□□□□ 0.42
Ube4aE9Q735 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC17.65■□□□□ 0.42
Ube4aE9Q735 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ube4aE9Q735 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ube4aE9Q735 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.65■□□□□ 0.42
Ube4aE9Q735 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ube4aE9Q735 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Ube4aE9Q735 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ube4aE9Q735 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ube4aE9Q735 BC001981-202ENSMUST00000191393 1545 ntBASIC17.65■□□□□ 0.42
Ube4aE9Q735 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ube4aE9Q735 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Ube4aE9Q735 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ube4aE9Q735 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ube4aE9Q735 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ube4aE9Q735 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ube4aE9Q735 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ube4aE9Q735 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ube4aE9Q735 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ube4aE9Q735 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ube4aE9Q735 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ube4aE9Q735 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ube4aE9Q735 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Ube4aE9Q735 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ube4aE9Q735 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ube4aE9Q735 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.64■□□□□ 0.41
Ube4aE9Q735 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ube4aE9Q735 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Ube4aE9Q735 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ube4aE9Q735 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ube4aE9Q735 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ube4aE9Q735 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ube4aE9Q735 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ube4aE9Q735 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ube4aE9Q735 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ube4aE9Q735 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC17.64■□□□□ 0.41
Ube4aE9Q735 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ube4aE9Q735 Hist1h2al-201ENSMUST00000091708 339 ntBASIC17.64■□□□□ 0.41
Ube4aE9Q735 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Ube4aE9Q735 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ube4aE9Q735 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Ube4aE9Q735 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.64■□□□□ 0.41
Ube4aE9Q735 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ube4aE9Q735 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ube4aE9Q735 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ube4aE9Q735 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ube4aE9Q735 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ube4aE9Q735 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ube4aE9Q735 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Ube4aE9Q735 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
Ube4aE9Q735 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ube4aE9Q735 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Ube4aE9Q735 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ube4aE9Q735 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Ube4aE9Q735 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ube4aE9Q735 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Ube4aE9Q735 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ube4aE9Q735 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ube4aE9Q735 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Ube4aE9Q735 Gm7820-201ENSMUST00000121012 1052 ntBASIC17.63■□□□□ 0.41
Ube4aE9Q735 AC121804.3-201ENSMUST00000223420 295 ntBASIC17.63■□□□□ 0.41
Ube4aE9Q735 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ube4aE9Q735 Gm20445-201ENSMUST00000061905 565 ntBASIC17.63■□□□□ 0.41
Ube4aE9Q735 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Ube4aE9Q735 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC17.63■□□□□ 0.41
Ube4aE9Q735 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ube4aE9Q735 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ube4aE9Q735 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Ube4aE9Q735 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ube4aE9Q735 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Ube4aE9Q735 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Ube4aE9Q735 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC17.63■□□□□ 0.41
Ube4aE9Q735 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ube4aE9Q735 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ube4aE9Q735 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ube4aE9Q735 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ube4aE9Q735 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC17.63■□□□□ 0.41
Ube4aE9Q735 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ube4aE9Q735 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ube4aE9Q735 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ube4aE9Q735 Gm22189-201ENSMUST00000103822 86 ntBASIC17.62■□□□□ 0.41
Ube4aE9Q735 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ube4aE9Q735 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC17.62■□□□□ 0.41
Ube4aE9Q735 Gm12859-201ENSMUST00000117834 427 ntBASIC17.62■□□□□ 0.41
Ube4aE9Q735 Gm6473-201ENSMUST00000188572 1210 ntBASIC17.62■□□□□ 0.41
Ube4aE9Q735 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC17.62■□□□□ 0.41
Ube4aE9Q735 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC17.62■□□□□ 0.41
Ube4aE9Q735 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Ube4aE9Q735 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC17.62■□□□□ 0.41
Ube4aE9Q735 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ube4aE9Q735 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ube4aE9Q735 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17.62■□□□□ 0.41
Ube4aE9Q735 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ube4aE9Q735 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 99.8 ms