Protein–RNA interactions for Protein: E9PX29

Sptbn4, Spectrin beta chain, mousemouse

Predictions only

Length 2,561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4E9PX29 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sptbn4E9PX29 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sptbn4E9PX29 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sptbn4E9PX29 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sptbn4E9PX29 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sptbn4E9PX29 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sptbn4E9PX29 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sptbn4E9PX29 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sptbn4E9PX29 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sptbn4E9PX29 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sptbn4E9PX29 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sptbn4E9PX29 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Sptbn4E9PX29 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Sptbn4E9PX29 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Sptbn4E9PX29 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.15□□□□□ -0.31
Sptbn4E9PX29 Gm44207-201ENSMUST00000204568 1424 ntBASIC13.14□□□□□ -0.31
Sptbn4E9PX29 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sptbn4E9PX29 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Sptbn4E9PX29 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sptbn4E9PX29 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sptbn4E9PX29 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sptbn4E9PX29 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sptbn4E9PX29 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Sptbn4E9PX29 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sptbn4E9PX29 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sptbn4E9PX29 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sptbn4E9PX29 Gm4993-201ENSMUST00000118719 1174 ntBASIC13.14□□□□□ -0.31
Sptbn4E9PX29 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
Sptbn4E9PX29 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC13.14□□□□□ -0.31
Sptbn4E9PX29 Gm43947-201ENSMUST00000203019 959 ntBASIC13.14□□□□□ -0.31
Sptbn4E9PX29 Mir433-201ENSMUST00000093564 124 ntBASIC13.14□□□□□ -0.31
Sptbn4E9PX29 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sptbn4E9PX29 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Sptbn4E9PX29 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sptbn4E9PX29 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sptbn4E9PX29 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Sptbn4E9PX29 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sptbn4E9PX29 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sptbn4E9PX29 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sptbn4E9PX29 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC13.14□□□□□ -0.31
Sptbn4E9PX29 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC13.14□□□□□ -0.31
Sptbn4E9PX29 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sptbn4E9PX29 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.14□□□□□ -0.31
Sptbn4E9PX29 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sptbn4E9PX29 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.14□□□□□ -0.31
Sptbn4E9PX29 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.14□□□□□ -0.31
Sptbn4E9PX29 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sptbn4E9PX29 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sptbn4E9PX29 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.13□□□□□ -0.31
Sptbn4E9PX29 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sptbn4E9PX29 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sptbn4E9PX29 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Sptbn4E9PX29 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sptbn4E9PX29 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sptbn4E9PX29 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sptbn4E9PX29 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sptbn4E9PX29 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sptbn4E9PX29 Gm15393-201ENSMUST00000120499 219 ntBASIC13.13□□□□□ -0.31
Sptbn4E9PX29 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sptbn4E9PX29 Gm13050-201ENSMUST00000122149 1345 ntBASIC13.13□□□□□ -0.31
Sptbn4E9PX29 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sptbn4E9PX29 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Sptbn4E9PX29 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sptbn4E9PX29 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sptbn4E9PX29 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sptbn4E9PX29 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sptbn4E9PX29 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sptbn4E9PX29 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sptbn4E9PX29 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Sptbn4E9PX29 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sptbn4E9PX29 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sptbn4E9PX29 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Sptbn4E9PX29 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sptbn4E9PX29 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sptbn4E9PX29 Gm22323-201ENSMUST00000103832 109 ntBASIC13.13□□□□□ -0.31
Sptbn4E9PX29 Ighv1-62-201ENSMUST00000193406 350 ntBASIC13.13□□□□□ -0.31
Sptbn4E9PX29 Gm19309-201ENSMUST00000218295 205 ntBASIC13.13□□□□□ -0.31
Sptbn4E9PX29 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Sptbn4E9PX29 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sptbn4E9PX29 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sptbn4E9PX29 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Sptbn4E9PX29 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sptbn4E9PX29 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC13.12□□□□□ -0.31
Sptbn4E9PX29 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sptbn4E9PX29 Gm15429-201ENSMUST00000151268 798 ntBASIC13.12□□□□□ -0.31
Sptbn4E9PX29 Gm4819-201ENSMUST00000182170 1009 ntBASIC13.12□□□□□ -0.31
Sptbn4E9PX29 Snora73a-201ENSMUST00000082453 205 ntBASIC13.12□□□□□ -0.31
Sptbn4E9PX29 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sptbn4E9PX29 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sptbn4E9PX29 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sptbn4E9PX29 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sptbn4E9PX29 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC13.12□□□□□ -0.31
Sptbn4E9PX29 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sptbn4E9PX29 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sptbn4E9PX29 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sptbn4E9PX29 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sptbn4E9PX29 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sptbn4E9PX29 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sptbn4E9PX29 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sptbn4E9PX29 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms