Protein–RNA interactions for Protein: A0A1W2P7H6

Mindy4b-ps, MINDY lysine 48 deubiquitinase 4B, pseudogene, mousemouse

Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mindy4b-psA0A1W2P7H6 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Mindy4b-psA0A1W2P7H6 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC15.59■□□□□ 0.09
Mindy4b-psA0A1W2P7H6 AC131710.1-201ENSMUST00000228336 990 ntBASIC15.59■□□□□ 0.09
Mindy4b-psA0A1W2P7H6 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC15.59■□□□□ 0.09
Mindy4b-psA0A1W2P7H6 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Mindy4b-psA0A1W2P7H6 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Mindy4b-psA0A1W2P7H6 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC15.59■□□□□ 0.09
Mindy4b-psA0A1W2P7H6 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Mindy4b-psA0A1W2P7H6 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Mindy4b-psA0A1W2P7H6 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Mindy4b-psA0A1W2P7H6 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Mindy4b-psA0A1W2P7H6 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Mindy4b-psA0A1W2P7H6 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Gm25287-201ENSMUST00000103846 110 ntBASIC15.58■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Gm22918-201ENSMUST00000103855 110 ntBASIC15.58■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Gm4691-201ENSMUST00000182339 1000 ntBASIC15.58■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Gm2451-201ENSMUST00000199447 999 ntBASIC15.58■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Gm10290-201ENSMUST00000200451 999 ntBASIC15.58■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Gm5312-201ENSMUST00000203728 547 ntBASIC15.58■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Gm42934-201ENSMUST00000196920 1345 ntBASIC15.58■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC15.58■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC15.58■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.57■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Gm5479-201ENSMUST00000160578 435 ntBASIC15.57■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Gm9726-201ENSMUST00000180321 678 ntBASIC15.57■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Gm38225-201ENSMUST00000194001 393 ntBASIC15.57■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC15.57■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Efs-202ENSMUST00000227037 2540 ntBASIC15.57■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC15.56■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC15.56■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.56■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.56■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.56■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Mindy4b-psA0A1W2P7H6 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms