Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Gm45779-201ENSMUST00000212189 4064 ntBASIC11.2□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC11.2□□□□□ -0.62
Trav3n-3A0A0G2JEM0 AC127302.2-201ENSMUST00000215212 268 ntBASIC11.2□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Gm45638-201ENSMUST00000211507 2878 ntBASIC11.2□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC11.2□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3n-3A0A0G2JEM0 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.19□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3n-3A0A0G2JEM0 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC11.19□□□□□ -0.62
Trav3n-3A0A0G2JEM0 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3n-3A0A0G2JEM0 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC11.19□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Gm18032-201ENSMUST00000222541 538 ntBASIC11.19□□□□□ -0.62
Trav3n-3A0A0G2JEM0 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Trav3n-3A0A0G2JEM0 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC11.19□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3n-3A0A0G2JEM0 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC11.19□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Gm12626-201ENSMUST00000117339 1983 ntBASIC11.19□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Gm12623-201ENSMUST00000119849 1983 ntBASIC11.19□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC11.18□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Gm14780-201ENSMUST00000118387 2737 ntBASIC11.18□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC11.18□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC11.18□□□□□ -0.62
Trav3n-3A0A0G2JEM0 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms