Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav6n-6A0A075B6B2 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav6n-6A0A075B6B2 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav6n-6A0A075B6B2 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav6n-6A0A075B6B2 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav6n-6A0A075B6B2 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav6n-6A0A075B6B2 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav6n-6A0A075B6B2 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav6n-6A0A075B6B2 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav6n-6A0A075B6B2 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav6n-6A0A075B6B2 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav6n-6A0A075B6B2 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav6n-6A0A075B6B2 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav6n-6A0A075B6B2 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav6n-6A0A075B6B2 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Trav6n-6A0A075B6B2 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav6n-6A0A075B6B2 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav6n-6A0A075B6B2 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav6n-6A0A075B6B2 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Trav6n-6A0A075B6B2 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav6n-6A0A075B6B2 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav6n-6A0A075B6B2 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav6n-6A0A075B6B2 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
Trav6n-6A0A075B6B2 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Trav6n-6A0A075B6B2 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav6n-6A0A075B6B2 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav6n-6A0A075B6B2 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav6n-6A0A075B6B2 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav6n-6A0A075B6B2 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Trav6n-6A0A075B6B2 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav6n-6A0A075B6B2 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav6n-6A0A075B6B2 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav6n-6A0A075B6B2 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav6n-6A0A075B6B2 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC11.04□□□□□ -0.64
Trav6n-6A0A075B6B2 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC11.04□□□□□ -0.64
Trav6n-6A0A075B6B2 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC11.04□□□□□ -0.64
Trav6n-6A0A075B6B2 Gm30437-201ENSMUST00000206086 1201 ntBASIC11.04□□□□□ -0.64
Trav6n-6A0A075B6B2 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC11.04□□□□□ -0.64
Trav6n-6A0A075B6B2 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav6n-6A0A075B6B2 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav6n-6A0A075B6B2 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav6n-6A0A075B6B2 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav6n-6A0A075B6B2 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC11.04□□□□□ -0.64
Trav6n-6A0A075B6B2 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav6n-6A0A075B6B2 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav6n-6A0A075B6B2 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
Trav6n-6A0A075B6B2 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav6n-6A0A075B6B2 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav6n-6A0A075B6B2 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav6n-6A0A075B6B2 Gm43570-201ENSMUST00000199951 3688 ntBASIC11.04□□□□□ -0.64
Trav6n-6A0A075B6B2 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav6n-6A0A075B6B2 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav6n-6A0A075B6B2 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav6n-6A0A075B6B2 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav6n-6A0A075B6B2 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav6n-6A0A075B6B2 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav6n-6A0A075B6B2 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC11.03□□□□□ -0.64
Trav6n-6A0A075B6B2 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav6n-6A0A075B6B2 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
Trav6n-6A0A075B6B2 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav6n-6A0A075B6B2 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav6n-6A0A075B6B2 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav6n-6A0A075B6B2 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav6n-6A0A075B6B2 Gm8784-201ENSMUST00000222096 1435 ntBASIC11.03□□□□□ -0.64
Trav6n-6A0A075B6B2 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Trav6n-6A0A075B6B2 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav6n-6A0A075B6B2 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav6n-6A0A075B6B2 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Trav6n-6A0A075B6B2 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav6n-6A0A075B6B2 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav6n-6A0A075B6B2 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav6n-6A0A075B6B2 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav6n-6A0A075B6B2 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Trav6n-6A0A075B6B2 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Trav6n-6A0A075B6B2 Gm25406-201ENSMUST00000157599 105 ntBASIC11.03□□□□□ -0.64
Trav6n-6A0A075B6B2 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Trav6n-6A0A075B6B2 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav6n-6A0A075B6B2 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav6n-6A0A075B6B2 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC11.03□□□□□ -0.64
Trav6n-6A0A075B6B2 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav6n-6A0A075B6B2 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC11.03□□□□□ -0.64
Trav6n-6A0A075B6B2 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Trav6n-6A0A075B6B2 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav6n-6A0A075B6B2 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav6n-6A0A075B6B2 Gm42769-201ENSMUST00000198576 1659 ntBASIC11.03□□□□□ -0.64
Trav6n-6A0A075B6B2 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Trav6n-6A0A075B6B2 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav6n-6A0A075B6B2 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav6n-6A0A075B6B2 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav6n-6A0A075B6B2 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Trav6n-6A0A075B6B2 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav6n-6A0A075B6B2 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav6n-6A0A075B6B2 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav6n-6A0A075B6B2 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav6n-6A0A075B6B2 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav6n-6A0A075B6B2 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav6n-6A0A075B6B2 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav6n-6A0A075B6B2 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav6n-6A0A075B6B2 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav6n-6A0A075B6B2 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms