Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6d-7A0A075B6B0 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6d-7A0A075B6B0 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6d-7A0A075B6B0 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6d-7A0A075B6B0 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC11.43□□□□□ -0.58
Trav6d-7A0A075B6B0 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6d-7A0A075B6B0 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6d-7A0A075B6B0 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6d-7A0A075B6B0 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6d-7A0A075B6B0 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6d-7A0A075B6B0 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6d-7A0A075B6B0 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trav6d-7A0A075B6B0 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6d-7A0A075B6B0 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6d-7A0A075B6B0 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC11.43□□□□□ -0.58
Trav6d-7A0A075B6B0 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6d-7A0A075B6B0 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC11.43□□□□□ -0.58
Trav6d-7A0A075B6B0 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6d-7A0A075B6B0 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6d-7A0A075B6B0 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6d-7A0A075B6B0 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC11.43□□□□□ -0.58
Trav6d-7A0A075B6B0 AC117588.1-201ENSMUST00000228510 999 ntBASIC11.43□□□□□ -0.58
Trav6d-7A0A075B6B0 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6d-7A0A075B6B0 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6d-7A0A075B6B0 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6d-7A0A075B6B0 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6d-7A0A075B6B0 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6d-7A0A075B6B0 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6d-7A0A075B6B0 Gm21451-201ENSMUST00000111062 2775 ntBASIC11.43□□□□□ -0.58
Trav6d-7A0A075B6B0 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6d-7A0A075B6B0 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6d-7A0A075B6B0 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6d-7A0A075B6B0 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Trav6d-7A0A075B6B0 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6d-7A0A075B6B0 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Trav6d-7A0A075B6B0 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6d-7A0A075B6B0 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Trav6d-7A0A075B6B0 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6d-7A0A075B6B0 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6d-7A0A075B6B0 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6d-7A0A075B6B0 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6d-7A0A075B6B0 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6d-7A0A075B6B0 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6d-7A0A075B6B0 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trav6d-7A0A075B6B0 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6d-7A0A075B6B0 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6d-7A0A075B6B0 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6d-7A0A075B6B0 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6d-7A0A075B6B0 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6d-7A0A075B6B0 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trav6d-7A0A075B6B0 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6d-7A0A075B6B0 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6d-7A0A075B6B0 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC11.42□□□□□ -0.58
Trav6d-7A0A075B6B0 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Trav6d-7A0A075B6B0 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC11.42□□□□□ -0.58
Trav6d-7A0A075B6B0 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC11.42□□□□□ -0.58
Trav6d-7A0A075B6B0 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC11.42□□□□□ -0.58
Trav6d-7A0A075B6B0 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trav6d-7A0A075B6B0 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC11.42□□□□□ -0.58
Trav6d-7A0A075B6B0 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6d-7A0A075B6B0 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6d-7A0A075B6B0 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6d-7A0A075B6B0 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6d-7A0A075B6B0 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Trav6d-7A0A075B6B0 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6d-7A0A075B6B0 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6d-7A0A075B6B0 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Trav6d-7A0A075B6B0 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6d-7A0A075B6B0 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6d-7A0A075B6B0 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Trav6d-7A0A075B6B0 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6d-7A0A075B6B0 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6d-7A0A075B6B0 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6d-7A0A075B6B0 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6d-7A0A075B6B0 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6d-7A0A075B6B0 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6d-7A0A075B6B0 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6d-7A0A075B6B0 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trav6d-7A0A075B6B0 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6d-7A0A075B6B0 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6d-7A0A075B6B0 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6d-7A0A075B6B0 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6d-7A0A075B6B0 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6d-7A0A075B6B0 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6d-7A0A075B6B0 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trav6d-7A0A075B6B0 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6d-7A0A075B6B0 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6d-7A0A075B6B0 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6d-7A0A075B6B0 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav6d-7A0A075B6B0 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6d-7A0A075B6B0 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6d-7A0A075B6B0 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6d-7A0A075B6B0 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trav6d-7A0A075B6B0 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trav6d-7A0A075B6B0 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6d-7A0A075B6B0 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trav6d-7A0A075B6B0 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6d-7A0A075B6B0 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav6d-7A0A075B6B0 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6d-7A0A075B6B0 Gm23547-201ENSMUST00000158210 271 ntBASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms