Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7n-4A0A075B620 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7n-4A0A075B620 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7n-4A0A075B620 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC11.18□□□□□ -0.62
Trav7n-4A0A075B620 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC11.18□□□□□ -0.62
Trav7n-4A0A075B620 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7n-4A0A075B620 Gm8349-201ENSMUST00000182720 1003 ntBASIC11.18□□□□□ -0.62
Trav7n-4A0A075B620 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7n-4A0A075B620 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7n-4A0A075B620 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Trav7n-4A0A075B620 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Trav7n-4A0A075B620 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7n-4A0A075B620 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Trav7n-4A0A075B620 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7n-4A0A075B620 Gm43570-201ENSMUST00000199951 3688 ntBASIC11.18□□□□□ -0.62
Trav7n-4A0A075B620 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7n-4A0A075B620 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7n-4A0A075B620 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7n-4A0A075B620 Acot6-202ENSMUST00000222921 3622 ntBASIC11.18□□□□□ -0.62
Trav7n-4A0A075B620 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Trav7n-4A0A075B620 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7n-4A0A075B620 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7n-4A0A075B620 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Trav7n-4A0A075B620 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7n-4A0A075B620 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7n-4A0A075B620 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7n-4A0A075B620 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7n-4A0A075B620 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7n-4A0A075B620 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav7n-4A0A075B620 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav7n-4A0A075B620 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Trav7n-4A0A075B620 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav7n-4A0A075B620 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav7n-4A0A075B620 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Trav7n-4A0A075B620 Gm12500-202ENSMUST00000186471 2428 ntBASIC11.17□□□□□ -0.62
Trav7n-4A0A075B620 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav7n-4A0A075B620 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav7n-4A0A075B620 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav7n-4A0A075B620 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav7n-4A0A075B620 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav7n-4A0A075B620 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav7n-4A0A075B620 AC130713.1-201ENSMUST00000228853 1096 ntBASIC11.17□□□□□ -0.62
Trav7n-4A0A075B620 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Trav7n-4A0A075B620 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav7n-4A0A075B620 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav7n-4A0A075B620 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav7n-4A0A075B620 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav7n-4A0A075B620 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav7n-4A0A075B620 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav7n-4A0A075B620 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav7n-4A0A075B620 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav7n-4A0A075B620 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC11.17□□□□□ -0.62
Trav7n-4A0A075B620 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav7n-4A0A075B620 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav7n-4A0A075B620 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav7n-4A0A075B620 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC11.17□□□□□ -0.62
Trav7n-4A0A075B620 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav7n-4A0A075B620 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav7n-4A0A075B620 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav7n-4A0A075B620 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC11.16□□□□□ -0.62
Trav7n-4A0A075B620 Gm45293-201ENSMUST00000209754 1812 ntBASIC11.16□□□□□ -0.62
Trav7n-4A0A075B620 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav7n-4A0A075B620 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav7n-4A0A075B620 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Trav7n-4A0A075B620 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav7n-4A0A075B620 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav7n-4A0A075B620 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav7n-4A0A075B620 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav7n-4A0A075B620 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav7n-4A0A075B620 Gm43364-201ENSMUST00000196046 3274 ntBASIC11.16□□□□□ -0.62
Trav7n-4A0A075B620 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav7n-4A0A075B620 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav7n-4A0A075B620 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav7n-4A0A075B620 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Trav7n-4A0A075B620 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav7n-4A0A075B620 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav7n-4A0A075B620 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav7n-4A0A075B620 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav7n-4A0A075B620 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Trav7n-4A0A075B620 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav7n-4A0A075B620 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav7n-4A0A075B620 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
Trav7n-4A0A075B620 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav7n-4A0A075B620 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Trav7n-4A0A075B620 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC11.16□□□□□ -0.62
Trav7n-4A0A075B620 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav7n-4A0A075B620 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav7n-4A0A075B620 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC11.16□□□□□ -0.62
Trav7n-4A0A075B620 Gm18101-201ENSMUST00000215769 548 ntBASIC11.16□□□□□ -0.62
Trav7n-4A0A075B620 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav7n-4A0A075B620 CT025689.6-201ENSMUST00000224991 1104 ntBASIC11.16□□□□□ -0.62
Trav7n-4A0A075B620 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC11.16□□□□□ -0.62
Trav7n-4A0A075B620 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav7n-4A0A075B620 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav7n-4A0A075B620 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav7n-4A0A075B620 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav7n-4A0A075B620 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav7n-4A0A075B620 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav7n-4A0A075B620 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC11.16□□□□□ -0.62
Trav7n-4A0A075B620 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms