Protein–RNA interactions for Protein: A0A075B604

Trav7n-5, T cell receptor alpha variable 7D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-5A0A075B604 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7n-5A0A075B604 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7n-5A0A075B604 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7n-5A0A075B604 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7n-5A0A075B604 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7n-5A0A075B604 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7n-5A0A075B604 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trav7n-5A0A075B604 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.1□□□□□ -0.47
Trav7n-5A0A075B604 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7n-5A0A075B604 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7n-5A0A075B604 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.1□□□□□ -0.47
Trav7n-5A0A075B604 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7n-5A0A075B604 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC12.1□□□□□ -0.47
Trav7n-5A0A075B604 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7n-5A0A075B604 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trav7n-5A0A075B604 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7n-5A0A075B604 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7n-5A0A075B604 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7n-5A0A075B604 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7n-5A0A075B604 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7n-5A0A075B604 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7n-5A0A075B604 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7n-5A0A075B604 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trav7n-5A0A075B604 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7n-5A0A075B604 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7n-5A0A075B604 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7n-5A0A075B604 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7n-5A0A075B604 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Trav7n-5A0A075B604 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7n-5A0A075B604 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7n-5A0A075B604 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7n-5A0A075B604 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trav7n-5A0A075B604 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trav7n-5A0A075B604 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav7n-5A0A075B604 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7n-5A0A075B604 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7n-5A0A075B604 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7n-5A0A075B604 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7n-5A0A075B604 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7n-5A0A075B604 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav7n-5A0A075B604 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav7n-5A0A075B604 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7n-5A0A075B604 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav7n-5A0A075B604 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7n-5A0A075B604 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trav7n-5A0A075B604 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.09□□□□□ -0.47
Trav7n-5A0A075B604 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Trav7n-5A0A075B604 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav7n-5A0A075B604 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7n-5A0A075B604 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7n-5A0A075B604 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7n-5A0A075B604 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7n-5A0A075B604 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7n-5A0A075B604 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav7n-5A0A075B604 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav7n-5A0A075B604 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7n-5A0A075B604 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Trav7n-5A0A075B604 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7n-5A0A075B604 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7n-5A0A075B604 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trav7n-5A0A075B604 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav7n-5A0A075B604 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7n-5A0A075B604 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7n-5A0A075B604 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7n-5A0A075B604 Gm11745-201ENSMUST00000121669 448 ntBASIC12.09□□□□□ -0.47
Trav7n-5A0A075B604 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7n-5A0A075B604 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Trav7n-5A0A075B604 Gm9726-201ENSMUST00000180321 678 ntBASIC12.09□□□□□ -0.47
Trav7n-5A0A075B604 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7n-5A0A075B604 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav7n-5A0A075B604 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Trav7n-5A0A075B604 Gm9182-201ENSMUST00000217829 639 ntBASIC12.09□□□□□ -0.47
Trav7n-5A0A075B604 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav7n-5A0A075B604 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7n-5A0A075B604 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7n-5A0A075B604 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trav7n-5A0A075B604 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7n-5A0A075B604 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.09□□□□□ -0.47
Trav7n-5A0A075B604 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7n-5A0A075B604 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav7n-5A0A075B604 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav7n-5A0A075B604 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.09□□□□□ -0.47
Trav7n-5A0A075B604 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7n-5A0A075B604 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav7n-5A0A075B604 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav7n-5A0A075B604 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav7n-5A0A075B604 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Trav7n-5A0A075B604 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav7n-5A0A075B604 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav7n-5A0A075B604 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav7n-5A0A075B604 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav7n-5A0A075B604 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Trav7n-5A0A075B604 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
Trav7n-5A0A075B604 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav7n-5A0A075B604 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav7n-5A0A075B604 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav7n-5A0A075B604 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav7n-5A0A075B604 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav7n-5A0A075B604 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav7n-5A0A075B604 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms