Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.06□□□□□ -0.16
Lhx9Q9WUH2 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lhx9Q9WUH2 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Lhx9Q9WUH2 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lhx9Q9WUH2 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lhx9Q9WUH2 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lhx9Q9WUH2 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Lhx9Q9WUH2 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lhx9Q9WUH2 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lhx9Q9WUH2 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Lhx9Q9WUH2 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Lhx9Q9WUH2 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lhx9Q9WUH2 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Lhx9Q9WUH2 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lhx9Q9WUH2 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.05□□□□□ -0.16
Lhx9Q9WUH2 Gm25287-201ENSMUST00000103846 110 ntBASIC14.05□□□□□ -0.16
Lhx9Q9WUH2 Gm22918-201ENSMUST00000103855 110 ntBASIC14.05□□□□□ -0.16
Lhx9Q9WUH2 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lhx9Q9WUH2 Gm6973-201ENSMUST00000117080 721 ntBASIC14.05□□□□□ -0.16
Lhx9Q9WUH2 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.05□□□□□ -0.16
Lhx9Q9WUH2 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Lhx9Q9WUH2 Gm27430-201ENSMUST00000184585 107 ntBASIC14.05□□□□□ -0.16
Lhx9Q9WUH2 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lhx9Q9WUH2 Gm44333-201ENSMUST00000197168 107 ntBASIC14.05□□□□□ -0.16
Lhx9Q9WUH2 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lhx9Q9WUH2 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Lhx9Q9WUH2 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Lhx9Q9WUH2 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lhx9Q9WUH2 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lhx9Q9WUH2 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lhx9Q9WUH2 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lhx9Q9WUH2 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lhx9Q9WUH2 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lhx9Q9WUH2 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Lhx9Q9WUH2 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lhx9Q9WUH2 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lhx9Q9WUH2 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.04□□□□□ -0.16
Lhx9Q9WUH2 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lhx9Q9WUH2 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lhx9Q9WUH2 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lhx9Q9WUH2 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lhx9Q9WUH2 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lhx9Q9WUH2 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lhx9Q9WUH2 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lhx9Q9WUH2 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lhx9Q9WUH2 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lhx9Q9WUH2 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Lhx9Q9WUH2 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Lhx9Q9WUH2 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.04□□□□□ -0.16
Lhx9Q9WUH2 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.04□□□□□ -0.16
Lhx9Q9WUH2 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lhx9Q9WUH2 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lhx9Q9WUH2 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.04□□□□□ -0.16
Lhx9Q9WUH2 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Lhx9Q9WUH2 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.04□□□□□ -0.16
Lhx9Q9WUH2 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lhx9Q9WUH2 Gm20949-201ENSMUST00000206478 952 ntBASIC14.04□□□□□ -0.16
Lhx9Q9WUH2 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lhx9Q9WUH2 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lhx9Q9WUH2 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lhx9Q9WUH2 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Lhx9Q9WUH2 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lhx9Q9WUH2 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lhx9Q9WUH2 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Lhx9Q9WUH2 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lhx9Q9WUH2 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lhx9Q9WUH2 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.04□□□□□ -0.16
Lhx9Q9WUH2 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lhx9Q9WUH2 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.04□□□□□ -0.16
Lhx9Q9WUH2 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lhx9Q9WUH2 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lhx9Q9WUH2 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Lhx9Q9WUH2 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lhx9Q9WUH2 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Lhx9Q9WUH2 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lhx9Q9WUH2 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lhx9Q9WUH2 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.03□□□□□ -0.16
Lhx9Q9WUH2 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lhx9Q9WUH2 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lhx9Q9WUH2 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.03□□□□□ -0.16
Lhx9Q9WUH2 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lhx9Q9WUH2 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lhx9Q9WUH2 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Lhx9Q9WUH2 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.03□□□□□ -0.16
Lhx9Q9WUH2 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Lhx9Q9WUH2 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lhx9Q9WUH2 Gm16026-204ENSMUST00000162652 683 ntBASIC14.03□□□□□ -0.16
Lhx9Q9WUH2 Mir7023-201ENSMUST00000185093 64 ntBASIC14.03□□□□□ -0.16
Lhx9Q9WUH2 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Lhx9Q9WUH2 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Lhx9Q9WUH2 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lhx9Q9WUH2 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Lhx9Q9WUH2 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Lhx9Q9WUH2 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Lhx9Q9WUH2 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Lhx9Q9WUH2 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Lhx9Q9WUH2 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lhx9Q9WUH2 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lhx9Q9WUH2 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lhx9Q9WUH2 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms