Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Gm43906-201ENSMUST00000203194 906 ntBASIC15.27■□□□□ 0.04
Msh5Q9QUM7 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.27■□□□□ 0.04
Msh5Q9QUM7 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC15.27■□□□□ 0.04
Msh5Q9QUM7 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.27■□□□□ 0.04
Msh5Q9QUM7 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Msh5Q9QUM7 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Msh5Q9QUM7 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Msh5Q9QUM7 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Msh5Q9QUM7 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
Msh5Q9QUM7 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Msh5Q9QUM7 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Msh5Q9QUM7 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Msh5Q9QUM7 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Msh5Q9QUM7 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Msh5Q9QUM7 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Msh5Q9QUM7 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Msh5Q9QUM7 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Msh5Q9QUM7 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Msh5Q9QUM7 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Msh5Q9QUM7 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Msh5Q9QUM7 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Msh5Q9QUM7 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Msh5Q9QUM7 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
Msh5Q9QUM7 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Msh5Q9QUM7 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Msh5Q9QUM7 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Msh5Q9QUM7 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Msh5Q9QUM7 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Msh5Q9QUM7 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Msh5Q9QUM7 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Msh5Q9QUM7 Gm649-201ENSMUST00000117284 1054 ntBASIC15.26■□□□□ 0.03
Msh5Q9QUM7 Gm13884-201ENSMUST00000118103 829 ntBASIC15.26■□□□□ 0.03
Msh5Q9QUM7 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.26■□□□□ 0.03
Msh5Q9QUM7 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Msh5Q9QUM7 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Msh5Q9QUM7 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Msh5Q9QUM7 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.26■□□□□ 0.03
Msh5Q9QUM7 Gm37751-201ENSMUST00000192440 1198 ntBASIC15.26■□□□□ 0.03
Msh5Q9QUM7 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.26■□□□□ 0.03
Msh5Q9QUM7 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Msh5Q9QUM7 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.26■□□□□ 0.03
Msh5Q9QUM7 Gm45399-201ENSMUST00000209955 1016 ntBASIC15.26■□□□□ 0.03
Msh5Q9QUM7 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC15.26■□□□□ 0.03
Msh5Q9QUM7 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Msh5Q9QUM7 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Msh5Q9QUM7 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Msh5Q9QUM7 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Msh5Q9QUM7 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Msh5Q9QUM7 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Msh5Q9QUM7 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Msh5Q9QUM7 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Msh5Q9QUM7 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Msh5Q9QUM7 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Msh5Q9QUM7 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Msh5Q9QUM7 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.26■□□□□ 0.03
Msh5Q9QUM7 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Msh5Q9QUM7 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Msh5Q9QUM7 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Msh5Q9QUM7 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Msh5Q9QUM7 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Msh5Q9QUM7 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Msh5Q9QUM7 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Msh5Q9QUM7 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Msh5Q9QUM7 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Msh5Q9QUM7 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Msh5Q9QUM7 Gm25990-201ENSMUST00000102440 86 ntBASIC15.25■□□□□ 0.03
Msh5Q9QUM7 Gm7862-201ENSMUST00000121461 292 ntBASIC15.25■□□□□ 0.03
Msh5Q9QUM7 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Msh5Q9QUM7 Gm27646-201ENSMUST00000183989 110 ntBASIC15.25■□□□□ 0.03
Msh5Q9QUM7 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC15.25■□□□□ 0.03
Msh5Q9QUM7 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Msh5Q9QUM7 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.25■□□□□ 0.03
Msh5Q9QUM7 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Msh5Q9QUM7 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Msh5Q9QUM7 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Msh5Q9QUM7 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Msh5Q9QUM7 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Msh5Q9QUM7 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Msh5Q9QUM7 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Msh5Q9QUM7 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Msh5Q9QUM7 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Msh5Q9QUM7 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.25■□□□□ 0.03
Msh5Q9QUM7 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Msh5Q9QUM7 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.25■□□□□ 0.03
Msh5Q9QUM7 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Msh5Q9QUM7 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Msh5Q9QUM7 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Msh5Q9QUM7 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Msh5Q9QUM7 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Msh5Q9QUM7 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Msh5Q9QUM7 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Msh5Q9QUM7 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Msh5Q9QUM7 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Msh5Q9QUM7 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Msh5Q9QUM7 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Msh5Q9QUM7 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.24■□□□□ 0.03
Msh5Q9QUM7 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Msh5Q9QUM7 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Msh5Q9QUM7 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Msh5Q9QUM7 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms