Protein–RNA interactions for Protein: Q9JM73

Srf, Serum response factor, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SrfQ9JM73 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SrfQ9JM73 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SrfQ9JM73 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SrfQ9JM73 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SrfQ9JM73 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.88□□□□□ -0.19
SrfQ9JM73 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
SrfQ9JM73 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
SrfQ9JM73 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SrfQ9JM73 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
SrfQ9JM73 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SrfQ9JM73 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SrfQ9JM73 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SrfQ9JM73 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SrfQ9JM73 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SrfQ9JM73 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SrfQ9JM73 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SrfQ9JM73 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SrfQ9JM73 Gm43377-201ENSMUST00000201640 455 ntBASIC13.88□□□□□ -0.19
SrfQ9JM73 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SrfQ9JM73 Gm18624-201ENSMUST00000220966 658 ntBASIC13.88□□□□□ -0.19
SrfQ9JM73 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
SrfQ9JM73 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SrfQ9JM73 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
SrfQ9JM73 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SrfQ9JM73 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SrfQ9JM73 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SrfQ9JM73 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SrfQ9JM73 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SrfQ9JM73 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SrfQ9JM73 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SrfQ9JM73 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SrfQ9JM73 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SrfQ9JM73 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SrfQ9JM73 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SrfQ9JM73 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SrfQ9JM73 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SrfQ9JM73 Gm11918-201ENSMUST00000121660 179 ntBASIC13.87□□□□□ -0.19
SrfQ9JM73 Gm14363-201ENSMUST00000122304 409 ntBASIC13.87□□□□□ -0.19
SrfQ9JM73 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
SrfQ9JM73 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.87□□□□□ -0.19
SrfQ9JM73 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SrfQ9JM73 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SrfQ9JM73 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SrfQ9JM73 Gm16973-201ENSMUST00000180682 1299 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SrfQ9JM73 Gm38134-201ENSMUST00000191858 1234 ntTSL 5 BASIC13.87□□□□□ -0.19
SrfQ9JM73 Gm18062-201ENSMUST00000208020 547 ntBASIC13.87□□□□□ -0.19
SrfQ9JM73 Gm18055-201ENSMUST00000208254 547 ntBASIC13.87□□□□□ -0.19
SrfQ9JM73 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SrfQ9JM73 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
SrfQ9JM73 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SrfQ9JM73 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SrfQ9JM73 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SrfQ9JM73 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
SrfQ9JM73 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
SrfQ9JM73 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SrfQ9JM73 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
SrfQ9JM73 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SrfQ9JM73 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SrfQ9JM73 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SrfQ9JM73 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SrfQ9JM73 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
SrfQ9JM73 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SrfQ9JM73 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SrfQ9JM73 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SrfQ9JM73 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SrfQ9JM73 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SrfQ9JM73 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SrfQ9JM73 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SrfQ9JM73 Gm15393-201ENSMUST00000120499 219 ntBASIC13.86□□□□□ -0.19
SrfQ9JM73 Gm12138-201ENSMUST00000122180 951 ntBASIC13.86□□□□□ -0.19
SrfQ9JM73 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.86□□□□□ -0.19
SrfQ9JM73 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SrfQ9JM73 Gm10766-202ENSMUST00000194123 606 ntBASIC13.86□□□□□ -0.19
SrfQ9JM73 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SrfQ9JM73 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SrfQ9JM73 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.86□□□□□ -0.19
SrfQ9JM73 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SrfQ9JM73 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.86□□□□□ -0.19
SrfQ9JM73 Gm17872-201ENSMUST00000222550 532 ntBASIC13.86□□□□□ -0.19
SrfQ9JM73 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.86□□□□□ -0.19
SrfQ9JM73 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.86□□□□□ -0.19
SrfQ9JM73 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SrfQ9JM73 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SrfQ9JM73 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SrfQ9JM73 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SrfQ9JM73 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SrfQ9JM73 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC13.86□□□□□ -0.19
SrfQ9JM73 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SrfQ9JM73 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SrfQ9JM73 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SrfQ9JM73 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SrfQ9JM73 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SrfQ9JM73 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
SrfQ9JM73 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SrfQ9JM73 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SrfQ9JM73 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SrfQ9JM73 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SrfQ9JM73 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SrfQ9JM73 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SrfQ9JM73 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms