Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Upk3aQ9JKX8 Gm2756-201ENSMUST00000195851 400 ntBASIC14.22□□□□□ -0.13
Upk3aQ9JKX8 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Upk3aQ9JKX8 Gm45098-201ENSMUST00000207179 657 ntBASIC14.22□□□□□ -0.13
Upk3aQ9JKX8 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.22□□□□□ -0.13
Upk3aQ9JKX8 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.22□□□□□ -0.13
Upk3aQ9JKX8 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Upk3aQ9JKX8 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk3aQ9JKX8 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk3aQ9JKX8 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Upk3aQ9JKX8 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Upk3aQ9JKX8 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Upk3aQ9JKX8 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk3aQ9JKX8 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Upk3aQ9JKX8 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Upk3aQ9JKX8 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk3aQ9JKX8 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk3aQ9JKX8 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Upk3aQ9JKX8 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk3aQ9JKX8 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk3aQ9JKX8 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Upk3aQ9JKX8 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk3aQ9JKX8 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Upk3aQ9JKX8 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk3aQ9JKX8 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Upk3aQ9JKX8 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk3aQ9JKX8 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Upk3aQ9JKX8 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Upk3aQ9JKX8 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Upk3aQ9JKX8 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk3aQ9JKX8 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk3aQ9JKX8 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Upk3aQ9JKX8 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Upk3aQ9JKX8 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Upk3aQ9JKX8 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.21□□□□□ -0.13
Upk3aQ9JKX8 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.21□□□□□ -0.13
Upk3aQ9JKX8 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Upk3aQ9JKX8 Gm14822-201ENSMUST00000122247 291 ntBASIC14.21□□□□□ -0.13
Upk3aQ9JKX8 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Upk3aQ9JKX8 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk3aQ9JKX8 Rprl2-201ENSMUST00000157150 290 ntBASIC14.21□□□□□ -0.13
Upk3aQ9JKX8 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Upk3aQ9JKX8 Gm37935-201ENSMUST00000192012 982 ntBASIC14.21□□□□□ -0.13
Upk3aQ9JKX8 Gm2213-201ENSMUST00000197485 688 ntBASIC14.21□□□□□ -0.13
Upk3aQ9JKX8 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.21□□□□□ -0.13
Upk3aQ9JKX8 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.21□□□□□ -0.13
Upk3aQ9JKX8 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk3aQ9JKX8 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk3aQ9JKX8 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk3aQ9JKX8 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
Upk3aQ9JKX8 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk3aQ9JKX8 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Upk3aQ9JKX8 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.21□□□□□ -0.14
Upk3aQ9JKX8 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Upk3aQ9JKX8 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Upk3aQ9JKX8 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Upk3aQ9JKX8 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Upk3aQ9JKX8 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Upk3aQ9JKX8 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Upk3aQ9JKX8 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Upk3aQ9JKX8 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Upk3aQ9JKX8 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Upk3aQ9JKX8 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Upk3aQ9JKX8 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Upk3aQ9JKX8 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.2□□□□□ -0.14
Upk3aQ9JKX8 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk3aQ9JKX8 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk3aQ9JKX8 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Upk3aQ9JKX8 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk3aQ9JKX8 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk3aQ9JKX8 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk3aQ9JKX8 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Upk3aQ9JKX8 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk3aQ9JKX8 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.2□□□□□ -0.14
Upk3aQ9JKX8 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Upk3aQ9JKX8 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk3aQ9JKX8 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Upk3aQ9JKX8 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk3aQ9JKX8 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk3aQ9JKX8 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.2□□□□□ -0.14
Upk3aQ9JKX8 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.2□□□□□ -0.14
Upk3aQ9JKX8 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.2□□□□□ -0.14
Upk3aQ9JKX8 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.2□□□□□ -0.14
Upk3aQ9JKX8 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.2□□□□□ -0.14
Upk3aQ9JKX8 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Upk3aQ9JKX8 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.2□□□□□ -0.14
Upk3aQ9JKX8 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.2□□□□□ -0.14
Upk3aQ9JKX8 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk3aQ9JKX8 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Upk3aQ9JKX8 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk3aQ9JKX8 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk3aQ9JKX8 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk3aQ9JKX8 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk3aQ9JKX8 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk3aQ9JKX8 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk3aQ9JKX8 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk3aQ9JKX8 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk3aQ9JKX8 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Upk3aQ9JKX8 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk3aQ9JKX8 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms