Protein–RNA interactions for Protein: Q9D0N8

Tmem88, Transmembrane protein 88, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem88Q9D0N8 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tmem88Q9D0N8 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Tmem88Q9D0N8 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tmem88Q9D0N8 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Tmem88Q9D0N8 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC11.72□□□□□ -0.53
Tmem88Q9D0N8 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tmem88Q9D0N8 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tmem88Q9D0N8 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC11.72□□□□□ -0.53
Tmem88Q9D0N8 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC11.72□□□□□ -0.53
Tmem88Q9D0N8 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tmem88Q9D0N8 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tmem88Q9D0N8 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tmem88Q9D0N8 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Tmem88Q9D0N8 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Tmem88Q9D0N8 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tmem88Q9D0N8 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tmem88Q9D0N8 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tmem88Q9D0N8 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tmem88Q9D0N8 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tmem88Q9D0N8 Grk6-205ENSMUST00000224653 2976 ntBASIC11.72□□□□□ -0.53
Tmem88Q9D0N8 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
Tmem88Q9D0N8 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tmem88Q9D0N8 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tmem88Q9D0N8 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tmem88Q9D0N8 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Tmem88Q9D0N8 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tmem88Q9D0N8 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC11.72□□□□□ -0.53
Tmem88Q9D0N8 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tmem88Q9D0N8 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Tmem88Q9D0N8 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tmem88Q9D0N8 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tmem88Q9D0N8 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tmem88Q9D0N8 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tmem88Q9D0N8 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tmem88Q9D0N8 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Tmem88Q9D0N8 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tmem88Q9D0N8 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tmem88Q9D0N8 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.71□□□□□ -0.53
Tmem88Q9D0N8 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tmem88Q9D0N8 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tmem88Q9D0N8 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tmem88Q9D0N8 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Tmem88Q9D0N8 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tmem88Q9D0N8 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tmem88Q9D0N8 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tmem88Q9D0N8 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tmem88Q9D0N8 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
Tmem88Q9D0N8 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tmem88Q9D0N8 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Tmem88Q9D0N8 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Tmem88Q9D0N8 Gm37055-201ENSMUST00000191866 133 ntBASIC11.71□□□□□ -0.53
Tmem88Q9D0N8 AC120002.2-201ENSMUST00000220205 773 ntBASIC11.71□□□□□ -0.53
Tmem88Q9D0N8 Il3ra-202ENSMUST00000223589 738 ntBASIC11.71□□□□□ -0.53
Tmem88Q9D0N8 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tmem88Q9D0N8 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tmem88Q9D0N8 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tmem88Q9D0N8 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Tmem88Q9D0N8 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Tmem88Q9D0N8 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tmem88Q9D0N8 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tmem88Q9D0N8 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tmem88Q9D0N8 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Tmem88Q9D0N8 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Tmem88Q9D0N8 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Tmem88Q9D0N8 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tmem88Q9D0N8 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tmem88Q9D0N8 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Tmem88Q9D0N8 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tmem88Q9D0N8 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Tmem88Q9D0N8 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tmem88Q9D0N8 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Tmem88Q9D0N8 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tmem88Q9D0N8 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tmem88Q9D0N8 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tmem88Q9D0N8 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Tmem88Q9D0N8 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tmem88Q9D0N8 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Tmem88Q9D0N8 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Tmem88Q9D0N8 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tmem88Q9D0N8 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tmem88Q9D0N8 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tmem88Q9D0N8 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tmem88Q9D0N8 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Tmem88Q9D0N8 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tmem88Q9D0N8 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC11.7□□□□□ -0.54
Tmem88Q9D0N8 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC11.7□□□□□ -0.54
Tmem88Q9D0N8 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Tmem88Q9D0N8 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Tmem88Q9D0N8 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tmem88Q9D0N8 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC11.7□□□□□ -0.54
Tmem88Q9D0N8 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC11.7□□□□□ -0.54
Tmem88Q9D0N8 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Tmem88Q9D0N8 Gm30025-201ENSMUST00000218555 728 ntBASIC11.7□□□□□ -0.54
Tmem88Q9D0N8 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tmem88Q9D0N8 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tmem88Q9D0N8 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Tmem88Q9D0N8 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tmem88Q9D0N8 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tmem88Q9D0N8 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Tmem88Q9D0N8 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms