Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ssr1Q9CY50 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Ssr1Q9CY50 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Ssr1Q9CY50 Gm4535-201ENSMUST00000182274 558 ntBASIC16.08■□□□□ 0.16
Ssr1Q9CY50 Gm28033-201ENSMUST00000184224 96 ntBASIC16.08■□□□□ 0.16
Ssr1Q9CY50 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.16
Ssr1Q9CY50 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ssr1Q9CY50 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ssr1Q9CY50 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ssr1Q9CY50 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ssr1Q9CY50 Gm10355-201ENSMUST00000097146 517 ntBASIC16.08■□□□□ 0.16
Ssr1Q9CY50 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ssr1Q9CY50 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ssr1Q9CY50 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ssr1Q9CY50 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ssr1Q9CY50 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ssr1Q9CY50 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ssr1Q9CY50 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.16
Ssr1Q9CY50 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ssr1Q9CY50 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC16.07■□□□□ 0.16
Ssr1Q9CY50 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ssr1Q9CY50 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ssr1Q9CY50 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ssr1Q9CY50 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ssr1Q9CY50 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.07■□□□□ 0.16
Ssr1Q9CY50 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ssr1Q9CY50 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ssr1Q9CY50 Gm13034-201ENSMUST00000121342 3177 ntBASIC16.07■□□□□ 0.16
Ssr1Q9CY50 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ssr1Q9CY50 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Ssr1Q9CY50 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ssr1Q9CY50 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ssr1Q9CY50 Gm43347-201ENSMUST00000200226 580 ntBASIC16.07■□□□□ 0.16
Ssr1Q9CY50 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.07■□□□□ 0.16
Ssr1Q9CY50 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ssr1Q9CY50 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ssr1Q9CY50 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.07■□□□□ 0.16
Ssr1Q9CY50 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ssr1Q9CY50 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ssr1Q9CY50 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ssr1Q9CY50 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ssr1Q9CY50 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Ssr1Q9CY50 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ssr1Q9CY50 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ssr1Q9CY50 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Ssr1Q9CY50 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ssr1Q9CY50 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Ssr1Q9CY50 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Ssr1Q9CY50 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ssr1Q9CY50 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ssr1Q9CY50 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ssr1Q9CY50 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ssr1Q9CY50 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Ssr1Q9CY50 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ssr1Q9CY50 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ssr1Q9CY50 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ssr1Q9CY50 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ssr1Q9CY50 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ssr1Q9CY50 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.06■□□□□ 0.16
Ssr1Q9CY50 Gm11780-201ENSMUST00000136880 516 ntBASIC16.06■□□□□ 0.16
Ssr1Q9CY50 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ssr1Q9CY50 Gm10499-201ENSMUST00000174094 934 ntBASIC16.06■□□□□ 0.16
Ssr1Q9CY50 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.06■□□□□ 0.16
Ssr1Q9CY50 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ssr1Q9CY50 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ssr1Q9CY50 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ssr1Q9CY50 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ssr1Q9CY50 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ssr1Q9CY50 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ssr1Q9CY50 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ssr1Q9CY50 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Ssr1Q9CY50 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ssr1Q9CY50 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Ssr1Q9CY50 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ssr1Q9CY50 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ssr1Q9CY50 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.05■□□□□ 0.16
Ssr1Q9CY50 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ssr1Q9CY50 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ssr1Q9CY50 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ssr1Q9CY50 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ssr1Q9CY50 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ssr1Q9CY50 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ssr1Q9CY50 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.05■□□□□ 0.16
Ssr1Q9CY50 Gm13418-201ENSMUST00000119097 944 ntBASIC16.05■□□□□ 0.16
Ssr1Q9CY50 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ssr1Q9CY50 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.05■□□□□ 0.16
Ssr1Q9CY50 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.05■□□□□ 0.16
Ssr1Q9CY50 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ssr1Q9CY50 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Ssr1Q9CY50 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ssr1Q9CY50 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ssr1Q9CY50 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ssr1Q9CY50 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Ssr1Q9CY50 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Ssr1Q9CY50 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ssr1Q9CY50 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ssr1Q9CY50 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssr1Q9CY50 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ssr1Q9CY50 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC16.04■□□□□ 0.16
Ssr1Q9CY50 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms