Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col25a1Q99MQ5 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col25a1Q99MQ5 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col25a1Q99MQ5 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col25a1Q99MQ5 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col25a1Q99MQ5 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col25a1Q99MQ5 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col25a1Q99MQ5 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col25a1Q99MQ5 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.29■□□□□ 0.04
Col25a1Q99MQ5 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col25a1Q99MQ5 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col25a1Q99MQ5 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col25a1Q99MQ5 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Col25a1Q99MQ5 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col25a1Q99MQ5 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.28■□□□□ 0.04
Col25a1Q99MQ5 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col25a1Q99MQ5 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col25a1Q99MQ5 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col25a1Q99MQ5 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Col25a1Q99MQ5 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Col25a1Q99MQ5 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col25a1Q99MQ5 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC15.28■□□□□ 0.04
Col25a1Q99MQ5 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col25a1Q99MQ5 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col25a1Q99MQ5 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col25a1Q99MQ5 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col25a1Q99MQ5 Mir7070-201ENSMUST00000183657 86 ntBASIC15.28■□□□□ 0.04
Col25a1Q99MQ5 Gm27701-201ENSMUST00000184498 110 ntBASIC15.28■□□□□ 0.04
Col25a1Q99MQ5 Gm28760-201ENSMUST00000185995 736 ntBASIC15.28■□□□□ 0.04
Col25a1Q99MQ5 Gm28911-201ENSMUST00000188837 117 ntBASIC15.28■□□□□ 0.04
Col25a1Q99MQ5 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col25a1Q99MQ5 Gm18934-201ENSMUST00000216671 1044 ntBASIC15.28■□□□□ 0.04
Col25a1Q99MQ5 Gm24526-201ENSMUST00000082921 158 ntBASIC15.28■□□□□ 0.04
Col25a1Q99MQ5 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col25a1Q99MQ5 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col25a1Q99MQ5 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col25a1Q99MQ5 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col25a1Q99MQ5 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
Col25a1Q99MQ5 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col25a1Q99MQ5 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.28■□□□□ 0.04
Col25a1Q99MQ5 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col25a1Q99MQ5 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Col25a1Q99MQ5 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col25a1Q99MQ5 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col25a1Q99MQ5 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Col25a1Q99MQ5 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Col25a1Q99MQ5 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col25a1Q99MQ5 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col25a1Q99MQ5 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col25a1Q99MQ5 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col25a1Q99MQ5 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Col25a1Q99MQ5 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Col25a1Q99MQ5 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC15.27■□□□□ 0.04
Col25a1Q99MQ5 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col25a1Q99MQ5 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col25a1Q99MQ5 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Col25a1Q99MQ5 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC15.27■□□□□ 0.04
Col25a1Q99MQ5 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col25a1Q99MQ5 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.27■□□□□ 0.04
Col25a1Q99MQ5 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col25a1Q99MQ5 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Col25a1Q99MQ5 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Col25a1Q99MQ5 Gm5356-201ENSMUST00000093326 615 ntBASIC15.27■□□□□ 0.04
Col25a1Q99MQ5 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Col25a1Q99MQ5 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Col25a1Q99MQ5 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col25a1Q99MQ5 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col25a1Q99MQ5 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col25a1Q99MQ5 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col25a1Q99MQ5 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col25a1Q99MQ5 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.27■□□□□ 0.03
Col25a1Q99MQ5 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col25a1Q99MQ5 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col25a1Q99MQ5 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col25a1Q99MQ5 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Col25a1Q99MQ5 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col25a1Q99MQ5 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Col25a1Q99MQ5 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col25a1Q99MQ5 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Col25a1Q99MQ5 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Col25a1Q99MQ5 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col25a1Q99MQ5 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.26■□□□□ 0.03
Col25a1Q99MQ5 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Col25a1Q99MQ5 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.26■□□□□ 0.03
Col25a1Q99MQ5 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col25a1Q99MQ5 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col25a1Q99MQ5 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col25a1Q99MQ5 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Col25a1Q99MQ5 Gm14723-201ENSMUST00000118686 215 ntBASIC15.26■□□□□ 0.03
Col25a1Q99MQ5 Gm14660-201ENSMUST00000119809 575 ntBASIC15.26■□□□□ 0.03
Col25a1Q99MQ5 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Col25a1Q99MQ5 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Col25a1Q99MQ5 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.26■□□□□ 0.03
Col25a1Q99MQ5 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col25a1Q99MQ5 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC15.26■□□□□ 0.03
Col25a1Q99MQ5 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Col25a1Q99MQ5 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col25a1Q99MQ5 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col25a1Q99MQ5 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Col25a1Q99MQ5 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms