Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha11Q91Y19 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.54■□□□□ 0.08
Pcdha11Q91Y19 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha11Q91Y19 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Pcdha11Q91Y19 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha11Q91Y19 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha11Q91Y19 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.54■□□□□ 0.08
Pcdha11Q91Y19 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha11Q91Y19 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha11Q91Y19 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha11Q91Y19 Gm18737-201ENSMUST00000173594 937 ntBASIC15.54■□□□□ 0.08
Pcdha11Q91Y19 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha11Q91Y19 Gm5312-201ENSMUST00000203728 547 ntBASIC15.54■□□□□ 0.08
Pcdha11Q91Y19 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha11Q91Y19 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.54■□□□□ 0.08
Pcdha11Q91Y19 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.54■□□□□ 0.08
Pcdha11Q91Y19 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha11Q91Y19 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha11Q91Y19 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Pcdha11Q91Y19 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha11Q91Y19 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha11Q91Y19 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha11Q91Y19 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha11Q91Y19 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.54■□□□□ 0.08
Pcdha11Q91Y19 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha11Q91Y19 Gm21009-201ENSMUST00000197169 1669 ntBASIC15.54■□□□□ 0.08
Pcdha11Q91Y19 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha11Q91Y19 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha11Q91Y19 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha11Q91Y19 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha11Q91Y19 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha11Q91Y19 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Pcdha11Q91Y19 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha11Q91Y19 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha11Q91Y19 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha11Q91Y19 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha11Q91Y19 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha11Q91Y19 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Pcdha11Q91Y19 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha11Q91Y19 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha11Q91Y19 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha11Q91Y19 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha11Q91Y19 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.53■□□□□ 0.08
Pcdha11Q91Y19 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC15.53■□□□□ 0.08
Pcdha11Q91Y19 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha11Q91Y19 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha11Q91Y19 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Pcdha11Q91Y19 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha11Q91Y19 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC15.53■□□□□ 0.08
Pcdha11Q91Y19 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC15.53■□□□□ 0.08
Pcdha11Q91Y19 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Pcdha11Q91Y19 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC15.53■□□□□ 0.08
Pcdha11Q91Y19 Gm27920-201ENSMUST00000183953 96 ntBASIC15.53■□□□□ 0.08
Pcdha11Q91Y19 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha11Q91Y19 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.53■□□□□ 0.08
Pcdha11Q91Y19 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC15.53■□□□□ 0.08
Pcdha11Q91Y19 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC15.53■□□□□ 0.08
Pcdha11Q91Y19 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Pcdha11Q91Y19 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha11Q91Y19 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha11Q91Y19 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha11Q91Y19 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha11Q91Y19 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha11Q91Y19 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha11Q91Y19 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha11Q91Y19 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha11Q91Y19 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha11Q91Y19 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha11Q91Y19 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Pcdha11Q91Y19 CT025626.1-201ENSMUST00000223735 1455 ntBASIC15.52■□□□□ 0.08
Pcdha11Q91Y19 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdha11Q91Y19 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.52■□□□□ 0.08
Pcdha11Q91Y19 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdha11Q91Y19 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Pcdha11Q91Y19 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdha11Q91Y19 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdha11Q91Y19 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdha11Q91Y19 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
Pcdha11Q91Y19 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdha11Q91Y19 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdha11Q91Y19 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdha11Q91Y19 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdha11Q91Y19 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdha11Q91Y19 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC15.52■□□□□ 0.08
Pcdha11Q91Y19 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.52■□□□□ 0.08
Pcdha11Q91Y19 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC15.52■□□□□ 0.08
Pcdha11Q91Y19 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Pcdha11Q91Y19 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdha11Q91Y19 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdha11Q91Y19 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.07
Pcdha11Q91Y19 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdha11Q91Y19 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdha11Q91Y19 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdha11Q91Y19 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdha11Q91Y19 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.52■□□□□ 0.07
Pcdha11Q91Y19 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdha11Q91Y19 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdha11Q91Y19 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha11Q91Y19 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha11Q91Y19 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms