Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.47□□□□□ -0.09
Pcdhb8Q91XZ2 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb8Q91XZ2 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb8Q91XZ2 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb8Q91XZ2 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.47□□□□□ -0.09
Pcdhb8Q91XZ2 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb8Q91XZ2 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.47□□□□□ -0.09
Pcdhb8Q91XZ2 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb8Q91XZ2 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Pcdhb8Q91XZ2 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb8Q91XZ2 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb8Q91XZ2 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Pcdhb8Q91XZ2 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb8Q91XZ2 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.47□□□□□ -0.09
Pcdhb8Q91XZ2 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb8Q91XZ2 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb8Q91XZ2 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb8Q91XZ2 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Pcdhb8Q91XZ2 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb8Q91XZ2 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.46□□□□□ -0.09
Pcdhb8Q91XZ2 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb8Q91XZ2 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb8Q91XZ2 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.46□□□□□ -0.09
Pcdhb8Q91XZ2 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb8Q91XZ2 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb8Q91XZ2 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb8Q91XZ2 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Pcdhb8Q91XZ2 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb8Q91XZ2 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
Pcdhb8Q91XZ2 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.46□□□□□ -0.09
Pcdhb8Q91XZ2 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Pcdhb8Q91XZ2 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.46□□□□□ -0.09
Pcdhb8Q91XZ2 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.46□□□□□ -0.09
Pcdhb8Q91XZ2 Gm2651-201ENSMUST00000203560 838 ntBASIC14.46□□□□□ -0.09
Pcdhb8Q91XZ2 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb8Q91XZ2 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb8Q91XZ2 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb8Q91XZ2 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb8Q91XZ2 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.46□□□□□ -0.09
Pcdhb8Q91XZ2 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb8Q91XZ2 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdhb8Q91XZ2 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdhb8Q91XZ2 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.46□□□□□ -0.1
Pcdhb8Q91XZ2 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdhb8Q91XZ2 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdhb8Q91XZ2 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb8Q91XZ2 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb8Q91XZ2 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb8Q91XZ2 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb8Q91XZ2 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb8Q91XZ2 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb8Q91XZ2 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb8Q91XZ2 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb8Q91XZ2 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb8Q91XZ2 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb8Q91XZ2 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb8Q91XZ2 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb8Q91XZ2 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb8Q91XZ2 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.45□□□□□ -0.1
Pcdhb8Q91XZ2 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Pcdhb8Q91XZ2 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Pcdhb8Q91XZ2 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb8Q91XZ2 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Pcdhb8Q91XZ2 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.45□□□□□ -0.1
Pcdhb8Q91XZ2 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb8Q91XZ2 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb8Q91XZ2 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb8Q91XZ2 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb8Q91XZ2 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb8Q91XZ2 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb8Q91XZ2 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Pcdhb8Q91XZ2 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb8Q91XZ2 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.45□□□□□ -0.1
Pcdhb8Q91XZ2 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb8Q91XZ2 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb8Q91XZ2 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb8Q91XZ2 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb8Q91XZ2 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Pcdhb8Q91XZ2 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb8Q91XZ2 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb8Q91XZ2 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb8Q91XZ2 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb8Q91XZ2 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb8Q91XZ2 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb8Q91XZ2 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Pcdhb8Q91XZ2 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.44□□□□□ -0.1
Pcdhb8Q91XZ2 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb8Q91XZ2 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb8Q91XZ2 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb8Q91XZ2 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb8Q91XZ2 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb8Q91XZ2 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb8Q91XZ2 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb8Q91XZ2 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.44□□□□□ -0.1
Pcdhb8Q91XZ2 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.44□□□□□ -0.1
Pcdhb8Q91XZ2 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.44□□□□□ -0.1
Pcdhb8Q91XZ2 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb8Q91XZ2 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Pcdhb8Q91XZ2 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb8Q91XZ2 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms