Protein–RNA interactions for Protein: Q8R4P5

Tmc1, Transmembrane channel-like protein 1, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmc1Q8R4P5 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tmc1Q8R4P5 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Tmc1Q8R4P5 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC18.1■□□□□ 0.49
Tmc1Q8R4P5 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
Tmc1Q8R4P5 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
Tmc1Q8R4P5 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tmc1Q8R4P5 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC18.1■□□□□ 0.49
Tmc1Q8R4P5 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Tmc1Q8R4P5 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tmc1Q8R4P5 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Tmc1Q8R4P5 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tmc1Q8R4P5 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tmc1Q8R4P5 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tmc1Q8R4P5 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tmc1Q8R4P5 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tmc1Q8R4P5 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tmc1Q8R4P5 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tmc1Q8R4P5 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tmc1Q8R4P5 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC18.09■□□□□ 0.49
Tmc1Q8R4P5 Gm12350-201ENSMUST00000121208 462 ntBASIC18.09■□□□□ 0.49
Tmc1Q8R4P5 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC18.09■□□□□ 0.49
Tmc1Q8R4P5 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tmc1Q8R4P5 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tmc1Q8R4P5 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Tmc1Q8R4P5 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Tmc1Q8R4P5 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tmc1Q8R4P5 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tmc1Q8R4P5 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tmc1Q8R4P5 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tmc1Q8R4P5 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tmc1Q8R4P5 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Tmc1Q8R4P5 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC18.09■□□□□ 0.49
Tmc1Q8R4P5 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tmc1Q8R4P5 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tmc1Q8R4P5 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tmc1Q8R4P5 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tmc1Q8R4P5 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tmc1Q8R4P5 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tmc1Q8R4P5 Ssr1-204ENSMUST00000225319 1610 ntBASIC18.09■□□□□ 0.49
Tmc1Q8R4P5 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Tmc1Q8R4P5 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Tmc1Q8R4P5 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Tmc1Q8R4P5 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Tmc1Q8R4P5 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Tmc1Q8R4P5 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Tmc1Q8R4P5 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC18.08■□□□□ 0.49
Tmc1Q8R4P5 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Tmc1Q8R4P5 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Tmc1Q8R4P5 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tmc1Q8R4P5 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tmc1Q8R4P5 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tmc1Q8R4P5 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tmc1Q8R4P5 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC18.08■□□□□ 0.48
Tmc1Q8R4P5 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Tmc1Q8R4P5 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC18.08■□□□□ 0.48
Tmc1Q8R4P5 Gm7506-201ENSMUST00000207758 815 ntBASIC18.08■□□□□ 0.48
Tmc1Q8R4P5 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC18.08■□□□□ 0.48
Tmc1Q8R4P5 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tmc1Q8R4P5 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Tmc1Q8R4P5 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
Tmc1Q8R4P5 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tmc1Q8R4P5 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
Tmc1Q8R4P5 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tmc1Q8R4P5 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tmc1Q8R4P5 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tmc1Q8R4P5 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tmc1Q8R4P5 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tmc1Q8R4P5 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tmc1Q8R4P5 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tmc1Q8R4P5 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tmc1Q8R4P5 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tmc1Q8R4P5 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Tmc1Q8R4P5 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Tmc1Q8R4P5 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tmc1Q8R4P5 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tmc1Q8R4P5 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tmc1Q8R4P5 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tmc1Q8R4P5 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tmc1Q8R4P5 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tmc1Q8R4P5 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tmc1Q8R4P5 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Tmc1Q8R4P5 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Tmc1Q8R4P5 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tmc1Q8R4P5 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC18.07■□□□□ 0.48
Tmc1Q8R4P5 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tmc1Q8R4P5 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Tmc1Q8R4P5 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC18.07■□□□□ 0.48
Tmc1Q8R4P5 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tmc1Q8R4P5 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tmc1Q8R4P5 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tmc1Q8R4P5 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC18.07■□□□□ 0.48
Tmc1Q8R4P5 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
Tmc1Q8R4P5 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tmc1Q8R4P5 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tmc1Q8R4P5 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tmc1Q8R4P5 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Tmc1Q8R4P5 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tmc1Q8R4P5 Gm42769-201ENSMUST00000198576 1659 ntBASIC18.06■□□□□ 0.48
Tmc1Q8R4P5 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
Tmc1Q8R4P5 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms