Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sf3a1Q8K4Z5 Gm2213-201ENSMUST00000197485 688 ntBASIC18.1■□□□□ 0.49
Sf3a1Q8K4Z5 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC18.1■□□□□ 0.49
Sf3a1Q8K4Z5 Gm45612-201ENSMUST00000211320 160 ntBASIC18.1■□□□□ 0.49
Sf3a1Q8K4Z5 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sf3a1Q8K4Z5 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sf3a1Q8K4Z5 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sf3a1Q8K4Z5 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Sf3a1Q8K4Z5 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Sf3a1Q8K4Z5 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sf3a1Q8K4Z5 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sf3a1Q8K4Z5 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sf3a1Q8K4Z5 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sf3a1Q8K4Z5 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sf3a1Q8K4Z5 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sf3a1Q8K4Z5 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sf3a1Q8K4Z5 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sf3a1Q8K4Z5 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sf3a1Q8K4Z5 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sf3a1Q8K4Z5 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC18.09■□□□□ 0.49
Sf3a1Q8K4Z5 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sf3a1Q8K4Z5 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sf3a1Q8K4Z5 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sf3a1Q8K4Z5 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sf3a1Q8K4Z5 Gm37935-201ENSMUST00000192012 982 ntBASIC18.09■□□□□ 0.49
Sf3a1Q8K4Z5 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Sf3a1Q8K4Z5 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sf3a1Q8K4Z5 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Sf3a1Q8K4Z5 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sf3a1Q8K4Z5 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sf3a1Q8K4Z5 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sf3a1Q8K4Z5 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Sf3a1Q8K4Z5 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sf3a1Q8K4Z5 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sf3a1Q8K4Z5 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sf3a1Q8K4Z5 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sf3a1Q8K4Z5 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sf3a1Q8K4Z5 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sf3a1Q8K4Z5 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sf3a1Q8K4Z5 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sf3a1Q8K4Z5 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sf3a1Q8K4Z5 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC18.08■□□□□ 0.49
Sf3a1Q8K4Z5 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sf3a1Q8K4Z5 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sf3a1Q8K4Z5 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Sf3a1Q8K4Z5 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sf3a1Q8K4Z5 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sf3a1Q8K4Z5 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sf3a1Q8K4Z5 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sf3a1Q8K4Z5 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Sf3a1Q8K4Z5 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC18.08■□□□□ 0.48
Sf3a1Q8K4Z5 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC18.08■□□□□ 0.48
Sf3a1Q8K4Z5 Gm11025-201ENSMUST00000140773 466 ntBASIC18.08■□□□□ 0.48
Sf3a1Q8K4Z5 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC18.08■□□□□ 0.48
Sf3a1Q8K4Z5 Gm24513-201ENSMUST00000174964 138 ntBASIC18.08■□□□□ 0.48
Sf3a1Q8K4Z5 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Sf3a1Q8K4Z5 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC18.08■□□□□ 0.48
Sf3a1Q8K4Z5 Gm43073-201ENSMUST00000198200 1189 ntBASIC18.08■□□□□ 0.48
Sf3a1Q8K4Z5 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Sf3a1Q8K4Z5 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC18.08■□□□□ 0.48
Sf3a1Q8K4Z5 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Sf3a1Q8K4Z5 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC18.08■□□□□ 0.48
Sf3a1Q8K4Z5 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sf3a1Q8K4Z5 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sf3a1Q8K4Z5 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sf3a1Q8K4Z5 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sf3a1Q8K4Z5 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Sf3a1Q8K4Z5 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sf3a1Q8K4Z5 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sf3a1Q8K4Z5 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sf3a1Q8K4Z5 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Sf3a1Q8K4Z5 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sf3a1Q8K4Z5 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC18.07■□□□□ 0.48
Sf3a1Q8K4Z5 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC18.07■□□□□ 0.48
Sf3a1Q8K4Z5 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC18.07■□□□□ 0.48
Sf3a1Q8K4Z5 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Sf3a1Q8K4Z5 Gm27397-201ENSMUST00000184997 107 ntBASIC18.07■□□□□ 0.48
Sf3a1Q8K4Z5 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sf3a1Q8K4Z5 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Sf3a1Q8K4Z5 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC18.07■□□□□ 0.48
Sf3a1Q8K4Z5 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sf3a1Q8K4Z5 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sf3a1Q8K4Z5 Gpr146-202ENSMUST00000053120 1040 ntBASIC18.07■□□□□ 0.48
Sf3a1Q8K4Z5 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sf3a1Q8K4Z5 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sf3a1Q8K4Z5 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sf3a1Q8K4Z5 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sf3a1Q8K4Z5 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Sf3a1Q8K4Z5 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sf3a1Q8K4Z5 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sf3a1Q8K4Z5 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sf3a1Q8K4Z5 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sf3a1Q8K4Z5 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sf3a1Q8K4Z5 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sf3a1Q8K4Z5 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sf3a1Q8K4Z5 AC174678.1-201ENSMUST00000228007 2749 ntBASIC18.07■□□□□ 0.48
Sf3a1Q8K4Z5 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Sf3a1Q8K4Z5 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sf3a1Q8K4Z5 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sf3a1Q8K4Z5 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms