Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Mir6956-201ENSMUST00000183598 62 ntBASIC16.18■□□□□ 0.18
Prpf31Q8CCF0 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC16.18■□□□□ 0.18
Prpf31Q8CCF0 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC16.18■□□□□ 0.18
Prpf31Q8CCF0 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC16.18■□□□□ 0.18
Prpf31Q8CCF0 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC16.18■□□□□ 0.18
Prpf31Q8CCF0 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf31Q8CCF0 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Prpf31Q8CCF0 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Prpf31Q8CCF0 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.18■□□□□ 0.18
Prpf31Q8CCF0 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf31Q8CCF0 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf31Q8CCF0 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.18■□□□□ 0.18
Prpf31Q8CCF0 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf31Q8CCF0 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf31Q8CCF0 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Prpf31Q8CCF0 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf31Q8CCF0 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf31Q8CCF0 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf31Q8CCF0 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Prpf31Q8CCF0 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf31Q8CCF0 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf31Q8CCF0 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.18■□□□□ 0.18
Prpf31Q8CCF0 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf31Q8CCF0 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf31Q8CCF0 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf31Q8CCF0 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf31Q8CCF0 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf31Q8CCF0 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC16.17■□□□□ 0.18
Prpf31Q8CCF0 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf31Q8CCF0 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf31Q8CCF0 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf31Q8CCF0 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Prpf31Q8CCF0 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Prpf31Q8CCF0 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC16.17■□□□□ 0.18
Prpf31Q8CCF0 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC16.17■□□□□ 0.18
Prpf31Q8CCF0 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf31Q8CCF0 Gm7774-201ENSMUST00000200064 533 ntBASIC16.17■□□□□ 0.18
Prpf31Q8CCF0 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf31Q8CCF0 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf31Q8CCF0 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Prpf31Q8CCF0 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf31Q8CCF0 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf31Q8CCF0 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf31Q8CCF0 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf31Q8CCF0 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf31Q8CCF0 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf31Q8CCF0 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf31Q8CCF0 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf31Q8CCF0 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf31Q8CCF0 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf31Q8CCF0 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Prpf31Q8CCF0 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf31Q8CCF0 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Prpf31Q8CCF0 Gm42934-201ENSMUST00000196920 1345 ntBASIC16.17■□□□□ 0.18
Prpf31Q8CCF0 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf31Q8CCF0 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf31Q8CCF0 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf31Q8CCF0 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Prpf31Q8CCF0 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf31Q8CCF0 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf31Q8CCF0 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf31Q8CCF0 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Prpf31Q8CCF0 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf31Q8CCF0 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf31Q8CCF0 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf31Q8CCF0 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf31Q8CCF0 Gm10253-201ENSMUST00000194270 940 ntBASIC16.16■□□□□ 0.18
Prpf31Q8CCF0 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf31Q8CCF0 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf31Q8CCF0 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Prpf31Q8CCF0 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf31Q8CCF0 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf31Q8CCF0 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf31Q8CCF0 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf31Q8CCF0 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf31Q8CCF0 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf31Q8CCF0 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Prpf31Q8CCF0 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf31Q8CCF0 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf31Q8CCF0 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf31Q8CCF0 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf31Q8CCF0 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf31Q8CCF0 Tcf21-202ENSMUST00000218002 1788 ntBASIC16.15■□□□□ 0.18
Prpf31Q8CCF0 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prpf31Q8CCF0 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prpf31Q8CCF0 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
Prpf31Q8CCF0 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prpf31Q8CCF0 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prpf31Q8CCF0 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC16.15■□□□□ 0.18
Prpf31Q8CCF0 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC16.15■□□□□ 0.18
Prpf31Q8CCF0 Gm44872-201ENSMUST00000207864 420 ntBASIC16.15■□□□□ 0.18
Prpf31Q8CCF0 Gm5779-201ENSMUST00000218467 910 ntBASIC16.15■□□□□ 0.18
Prpf31Q8CCF0 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prpf31Q8CCF0 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prpf31Q8CCF0 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.15■□□□□ 0.18
Prpf31Q8CCF0 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Prpf31Q8CCF0 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Prpf31Q8CCF0 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prpf31Q8CCF0 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC16.15■□□□□ 0.18
Prpf31Q8CCF0 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms