Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lysmd4Q8CC84 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Lysmd4Q8CC84 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lysmd4Q8CC84 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lysmd4Q8CC84 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Lysmd4Q8CC84 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lysmd4Q8CC84 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Lysmd4Q8CC84 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Lysmd4Q8CC84 AC108846.1-201ENSMUST00000214531 513 ntBASIC13.28□□□□□ -0.28
Lysmd4Q8CC84 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Lysmd4Q8CC84 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lysmd4Q8CC84 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lysmd4Q8CC84 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lysmd4Q8CC84 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC13.28□□□□□ -0.28
Lysmd4Q8CC84 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Lysmd4Q8CC84 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lysmd4Q8CC84 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lysmd4Q8CC84 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.28□□□□□ -0.28
Lysmd4Q8CC84 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.28□□□□□ -0.28
Lysmd4Q8CC84 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.28□□□□□ -0.28
Lysmd4Q8CC84 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Lysmd4Q8CC84 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lysmd4Q8CC84 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lysmd4Q8CC84 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lysmd4Q8CC84 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lysmd4Q8CC84 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.28
Lysmd4Q8CC84 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lysmd4Q8CC84 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Lysmd4Q8CC84 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lysmd4Q8CC84 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Lysmd4Q8CC84 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lysmd4Q8CC84 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lysmd4Q8CC84 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.28
Lysmd4Q8CC84 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.27□□□□□ -0.29
Lysmd4Q8CC84 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lysmd4Q8CC84 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC13.27□□□□□ -0.29
Lysmd4Q8CC84 Gm27704-201ENSMUST00000185094 107 ntBASIC13.27□□□□□ -0.29
Lysmd4Q8CC84 Gm33142-201ENSMUST00000193913 867 ntBASIC13.27□□□□□ -0.29
Lysmd4Q8CC84 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.27□□□□□ -0.29
Lysmd4Q8CC84 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.27□□□□□ -0.29
Lysmd4Q8CC84 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lysmd4Q8CC84 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lysmd4Q8CC84 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lysmd4Q8CC84 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Lysmd4Q8CC84 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lysmd4Q8CC84 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lysmd4Q8CC84 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lysmd4Q8CC84 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Lysmd4Q8CC84 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lysmd4Q8CC84 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Lysmd4Q8CC84 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lysmd4Q8CC84 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lysmd4Q8CC84 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lysmd4Q8CC84 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lysmd4Q8CC84 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Lysmd4Q8CC84 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lysmd4Q8CC84 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Lysmd4Q8CC84 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lysmd4Q8CC84 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lysmd4Q8CC84 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Lysmd4Q8CC84 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.27□□□□□ -0.29
Lysmd4Q8CC84 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lysmd4Q8CC84 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.27□□□□□ -0.29
Lysmd4Q8CC84 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.26□□□□□ -0.29
Lysmd4Q8CC84 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.26□□□□□ -0.29
Lysmd4Q8CC84 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lysmd4Q8CC84 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Lysmd4Q8CC84 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Lysmd4Q8CC84 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Lysmd4Q8CC84 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lysmd4Q8CC84 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Lysmd4Q8CC84 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Lysmd4Q8CC84 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lysmd4Q8CC84 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Lysmd4Q8CC84 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lysmd4Q8CC84 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lysmd4Q8CC84 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lysmd4Q8CC84 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lysmd4Q8CC84 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC13.26□□□□□ -0.29
Lysmd4Q8CC84 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Lysmd4Q8CC84 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.26□□□□□ -0.29
Lysmd4Q8CC84 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lysmd4Q8CC84 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lysmd4Q8CC84 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lysmd4Q8CC84 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lysmd4Q8CC84 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lysmd4Q8CC84 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lysmd4Q8CC84 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lysmd4Q8CC84 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lysmd4Q8CC84 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lysmd4Q8CC84 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lysmd4Q8CC84 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Lysmd4Q8CC84 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Lysmd4Q8CC84 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lysmd4Q8CC84 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lysmd4Q8CC84 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lysmd4Q8CC84 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lysmd4Q8CC84 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lysmd4Q8CC84 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.25□□□□□ -0.29
Lysmd4Q8CC84 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms