Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc60Q8C4J0 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc60Q8C4J0 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC18.86■□□□□ 0.61
Ccdc60Q8C4J0 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC18.86■□□□□ 0.61
Ccdc60Q8C4J0 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc60Q8C4J0 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc60Q8C4J0 Gm24513-201ENSMUST00000174964 138 ntBASIC18.86■□□□□ 0.61
Ccdc60Q8C4J0 Gm27397-201ENSMUST00000184997 107 ntBASIC18.86■□□□□ 0.61
Ccdc60Q8C4J0 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC18.86■□□□□ 0.61
Ccdc60Q8C4J0 AC131187.1-201ENSMUST00000224567 809 ntBASIC18.86■□□□□ 0.61
Ccdc60Q8C4J0 AC124549.3-201ENSMUST00000225541 367 ntBASIC18.86■□□□□ 0.61
Ccdc60Q8C4J0 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC18.86■□□□□ 0.61
Ccdc60Q8C4J0 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc60Q8C4J0 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc60Q8C4J0 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Ccdc60Q8C4J0 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc60Q8C4J0 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc60Q8C4J0 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc60Q8C4J0 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc60Q8C4J0 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc60Q8C4J0 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc60Q8C4J0 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc60Q8C4J0 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Ccdc60Q8C4J0 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc60Q8C4J0 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc60Q8C4J0 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
Ccdc60Q8C4J0 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc60Q8C4J0 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc60Q8C4J0 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc60Q8C4J0 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc60Q8C4J0 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc60Q8C4J0 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc60Q8C4J0 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc60Q8C4J0 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc60Q8C4J0 Gm11745-201ENSMUST00000121669 448 ntBASIC18.85■□□□□ 0.61
Ccdc60Q8C4J0 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC18.85■□□□□ 0.61
Ccdc60Q8C4J0 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc60Q8C4J0 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC18.85■□□□□ 0.61
Ccdc60Q8C4J0 Gm37935-201ENSMUST00000192012 982 ntBASIC18.85■□□□□ 0.61
Ccdc60Q8C4J0 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC18.85■□□□□ 0.61
Ccdc60Q8C4J0 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc60Q8C4J0 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Ccdc60Q8C4J0 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc60Q8C4J0 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC18.85■□□□□ 0.61
Ccdc60Q8C4J0 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc60Q8C4J0 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc60Q8C4J0 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc60Q8C4J0 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Ccdc60Q8C4J0 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc60Q8C4J0 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc60Q8C4J0 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc60Q8C4J0 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc60Q8C4J0 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc60Q8C4J0 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC18.84■□□□□ 0.61
Ccdc60Q8C4J0 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc60Q8C4J0 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc60Q8C4J0 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc60Q8C4J0 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Ccdc60Q8C4J0 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc60Q8C4J0 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc60Q8C4J0 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Ccdc60Q8C4J0 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc60Q8C4J0 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc60Q8C4J0 Gm6973-201ENSMUST00000117080 721 ntBASIC18.84■□□□□ 0.61
Ccdc60Q8C4J0 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc60Q8C4J0 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc60Q8C4J0 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc60Q8C4J0 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc60Q8C4J0 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc60Q8C4J0 Gm43598-201ENSMUST00000202482 2479 ntBASIC18.84■□□□□ 0.61
Ccdc60Q8C4J0 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Ccdc60Q8C4J0 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc60Q8C4J0 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Ccdc60Q8C4J0 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc60Q8C4J0 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc60Q8C4J0 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC18.84■□□□□ 0.61
Ccdc60Q8C4J0 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
Ccdc60Q8C4J0 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC18.84■□□□□ 0.61
Ccdc60Q8C4J0 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc60Q8C4J0 AC126250.1-201ENSMUST00000228343 1768 ntBASIC18.83■□□□□ 0.61
Ccdc60Q8C4J0 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC18.83■□□□□ 0.61
Ccdc60Q8C4J0 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Ccdc60Q8C4J0 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc60Q8C4J0 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC18.83■□□□□ 0.61
Ccdc60Q8C4J0 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc60Q8C4J0 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC18.83■□□□□ 0.61
Ccdc60Q8C4J0 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc60Q8C4J0 Gm8749-201ENSMUST00000117737 331 ntBASIC18.83■□□□□ 0.6
Ccdc60Q8C4J0 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC18.83■□□□□ 0.6
Ccdc60Q8C4J0 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC18.83■□□□□ 0.6
Ccdc60Q8C4J0 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Ccdc60Q8C4J0 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc60Q8C4J0 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc60Q8C4J0 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC18.83■□□□□ 0.6
Ccdc60Q8C4J0 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
Ccdc60Q8C4J0 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc60Q8C4J0 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc60Q8C4J0 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc60Q8C4J0 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc60Q8C4J0 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms