Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tsen54Q8C2A2 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tsen54Q8C2A2 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Tsen54Q8C2A2 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tsen54Q8C2A2 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tsen54Q8C2A2 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tsen54Q8C2A2 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Tsen54Q8C2A2 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tsen54Q8C2A2 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tsen54Q8C2A2 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tsen54Q8C2A2 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Tsen54Q8C2A2 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC12.41□□□□□ -0.42
Tsen54Q8C2A2 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC12.41□□□□□ -0.42
Tsen54Q8C2A2 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tsen54Q8C2A2 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tsen54Q8C2A2 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tsen54Q8C2A2 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tsen54Q8C2A2 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC12.41□□□□□ -0.42
Tsen54Q8C2A2 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Tsen54Q8C2A2 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tsen54Q8C2A2 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC12.41□□□□□ -0.42
Tsen54Q8C2A2 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tsen54Q8C2A2 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tsen54Q8C2A2 Gm10819-201ENSMUST00000099988 561 ntBASIC12.41□□□□□ -0.42
Tsen54Q8C2A2 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tsen54Q8C2A2 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tsen54Q8C2A2 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tsen54Q8C2A2 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tsen54Q8C2A2 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tsen54Q8C2A2 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tsen54Q8C2A2 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tsen54Q8C2A2 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.41□□□□□ -0.42
Tsen54Q8C2A2 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tsen54Q8C2A2 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tsen54Q8C2A2 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tsen54Q8C2A2 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Tsen54Q8C2A2 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tsen54Q8C2A2 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tsen54Q8C2A2 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tsen54Q8C2A2 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tsen54Q8C2A2 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tsen54Q8C2A2 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tsen54Q8C2A2 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Tsen54Q8C2A2 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tsen54Q8C2A2 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tsen54Q8C2A2 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.4□□□□□ -0.42
Tsen54Q8C2A2 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tsen54Q8C2A2 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tsen54Q8C2A2 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tsen54Q8C2A2 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tsen54Q8C2A2 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tsen54Q8C2A2 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tsen54Q8C2A2 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tsen54Q8C2A2 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tsen54Q8C2A2 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tsen54Q8C2A2 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tsen54Q8C2A2 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tsen54Q8C2A2 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tsen54Q8C2A2 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Tsen54Q8C2A2 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tsen54Q8C2A2 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tsen54Q8C2A2 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tsen54Q8C2A2 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tsen54Q8C2A2 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tsen54Q8C2A2 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Tsen54Q8C2A2 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.4□□□□□ -0.42
Tsen54Q8C2A2 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Tsen54Q8C2A2 Gm9103-201ENSMUST00000119371 405 ntBASIC12.4□□□□□ -0.42
Tsen54Q8C2A2 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.4□□□□□ -0.42
Tsen54Q8C2A2 Gm18669-201ENSMUST00000216049 778 ntBASIC12.4□□□□□ -0.42
Tsen54Q8C2A2 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC12.4□□□□□ -0.42
Tsen54Q8C2A2 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tsen54Q8C2A2 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tsen54Q8C2A2 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tsen54Q8C2A2 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.4□□□□□ -0.42
Tsen54Q8C2A2 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tsen54Q8C2A2 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tsen54Q8C2A2 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tsen54Q8C2A2 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tsen54Q8C2A2 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tsen54Q8C2A2 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Tsen54Q8C2A2 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Tsen54Q8C2A2 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Tsen54Q8C2A2 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.39□□□□□ -0.43
Tsen54Q8C2A2 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tsen54Q8C2A2 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tsen54Q8C2A2 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tsen54Q8C2A2 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tsen54Q8C2A2 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Tsen54Q8C2A2 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tsen54Q8C2A2 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.39□□□□□ -0.43
Tsen54Q8C2A2 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.39□□□□□ -0.43
Tsen54Q8C2A2 AC132265.1-201ENSMUST00000219233 1665 ntBASIC12.39□□□□□ -0.43
Tsen54Q8C2A2 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tsen54Q8C2A2 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Tsen54Q8C2A2 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tsen54Q8C2A2 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC12.39□□□□□ -0.43
Tsen54Q8C2A2 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tsen54Q8C2A2 Gm13312-201ENSMUST00000119631 718 ntBASIC12.39□□□□□ -0.43
Tsen54Q8C2A2 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms