Protein–RNA interactions for Protein: Q8BMN3

Chrnb3, Neuronal acetylcholine receptor subunit beta-3, mousemouse

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrnb3Q8BMN3 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chrnb3Q8BMN3 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chrnb3Q8BMN3 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
Chrnb3Q8BMN3 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chrnb3Q8BMN3 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Chrnb3Q8BMN3 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
Chrnb3Q8BMN3 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Chrnb3Q8BMN3 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Chrnb3Q8BMN3 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Chrnb3Q8BMN3 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Chrnb3Q8BMN3 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Chrnb3Q8BMN3 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chrnb3Q8BMN3 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.45□□□□□ -0.1
Chrnb3Q8BMN3 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Chrnb3Q8BMN3 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chrnb3Q8BMN3 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chrnb3Q8BMN3 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Chrnb3Q8BMN3 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chrnb3Q8BMN3 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chrnb3Q8BMN3 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Chrnb3Q8BMN3 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chrnb3Q8BMN3 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Chrnb3Q8BMN3 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chrnb3Q8BMN3 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chrnb3Q8BMN3 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chrnb3Q8BMN3 Gm15920-201ENSMUST00000118998 402 ntBASIC14.45□□□□□ -0.1
Chrnb3Q8BMN3 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.45□□□□□ -0.1
Chrnb3Q8BMN3 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Chrnb3Q8BMN3 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Chrnb3Q8BMN3 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Chrnb3Q8BMN3 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Chrnb3Q8BMN3 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.45□□□□□ -0.1
Chrnb3Q8BMN3 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chrnb3Q8BMN3 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.45□□□□□ -0.1
Chrnb3Q8BMN3 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.45□□□□□ -0.1
Chrnb3Q8BMN3 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.45□□□□□ -0.1
Chrnb3Q8BMN3 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chrnb3Q8BMN3 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Chrnb3Q8BMN3 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chrnb3Q8BMN3 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chrnb3Q8BMN3 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chrnb3Q8BMN3 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chrnb3Q8BMN3 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Chrnb3Q8BMN3 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Chrnb3Q8BMN3 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chrnb3Q8BMN3 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chrnb3Q8BMN3 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chrnb3Q8BMN3 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Chrnb3Q8BMN3 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chrnb3Q8BMN3 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chrnb3Q8BMN3 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Chrnb3Q8BMN3 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chrnb3Q8BMN3 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chrnb3Q8BMN3 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chrnb3Q8BMN3 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chrnb3Q8BMN3 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chrnb3Q8BMN3 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chrnb3Q8BMN3 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.44□□□□□ -0.1
Chrnb3Q8BMN3 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Chrnb3Q8BMN3 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chrnb3Q8BMN3 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chrnb3Q8BMN3 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chrnb3Q8BMN3 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chrnb3Q8BMN3 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chrnb3Q8BMN3 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.44□□□□□ -0.1
Chrnb3Q8BMN3 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.44□□□□□ -0.1
Chrnb3Q8BMN3 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Chrnb3Q8BMN3 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Chrnb3Q8BMN3 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.44□□□□□ -0.1
Chrnb3Q8BMN3 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chrnb3Q8BMN3 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.44□□□□□ -0.1
Chrnb3Q8BMN3 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.44□□□□□ -0.1
Chrnb3Q8BMN3 Gm15483-201ENSMUST00000120338 456 ntBASIC14.44□□□□□ -0.1
Chrnb3Q8BMN3 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.44□□□□□ -0.1
Chrnb3Q8BMN3 Gm38225-201ENSMUST00000194001 393 ntBASIC14.44□□□□□ -0.1
Chrnb3Q8BMN3 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chrnb3Q8BMN3 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Chrnb3Q8BMN3 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chrnb3Q8BMN3 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Chrnb3Q8BMN3 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chrnb3Q8BMN3 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chrnb3Q8BMN3 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chrnb3Q8BMN3 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chrnb3Q8BMN3 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chrnb3Q8BMN3 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chrnb3Q8BMN3 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chrnb3Q8BMN3 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chrnb3Q8BMN3 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chrnb3Q8BMN3 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chrnb3Q8BMN3 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Chrnb3Q8BMN3 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chrnb3Q8BMN3 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chrnb3Q8BMN3 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.43□□□□□ -0.1
Chrnb3Q8BMN3 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Chrnb3Q8BMN3 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chrnb3Q8BMN3 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Chrnb3Q8BMN3 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chrnb3Q8BMN3 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chrnb3Q8BMN3 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Chrnb3Q8BMN3 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms