Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf38Q8BI21 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Rnf38Q8BI21 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf38Q8BI21 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf38Q8BI21 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf38Q8BI21 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf38Q8BI21 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
Rnf38Q8BI21 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf38Q8BI21 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Rnf38Q8BI21 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf38Q8BI21 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf38Q8BI21 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf38Q8BI21 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Rnf38Q8BI21 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.29□□□□□ -0.12
Rnf38Q8BI21 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.29□□□□□ -0.12
Rnf38Q8BI21 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf38Q8BI21 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf38Q8BI21 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf38Q8BI21 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.29□□□□□ -0.12
Rnf38Q8BI21 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.29□□□□□ -0.12
Rnf38Q8BI21 Gm6089-201ENSMUST00000197666 938 ntBASIC14.29□□□□□ -0.12
Rnf38Q8BI21 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf38Q8BI21 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf38Q8BI21 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf38Q8BI21 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf38Q8BI21 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf38Q8BI21 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf38Q8BI21 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Rnf38Q8BI21 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Rnf38Q8BI21 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf38Q8BI21 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf38Q8BI21 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf38Q8BI21 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf38Q8BI21 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf38Q8BI21 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf38Q8BI21 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.29□□□□□ -0.12
Rnf38Q8BI21 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf38Q8BI21 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf38Q8BI21 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf38Q8BI21 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf38Q8BI21 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Rnf38Q8BI21 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Rnf38Q8BI21 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf38Q8BI21 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.28□□□□□ -0.12
Rnf38Q8BI21 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf38Q8BI21 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf38Q8BI21 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf38Q8BI21 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf38Q8BI21 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.28□□□□□ -0.12
Rnf38Q8BI21 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.28□□□□□ -0.12
Rnf38Q8BI21 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf38Q8BI21 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf38Q8BI21 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.28□□□□□ -0.12
Rnf38Q8BI21 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.28□□□□□ -0.12
Rnf38Q8BI21 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.28□□□□□ -0.12
Rnf38Q8BI21 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf38Q8BI21 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.28□□□□□ -0.12
Rnf38Q8BI21 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.28□□□□□ -0.12
Rnf38Q8BI21 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.28□□□□□ -0.12
Rnf38Q8BI21 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf38Q8BI21 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf38Q8BI21 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf38Q8BI21 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf38Q8BI21 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Rnf38Q8BI21 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf38Q8BI21 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf38Q8BI21 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf38Q8BI21 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.28□□□□□ -0.12
Rnf38Q8BI21 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf38Q8BI21 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Rnf38Q8BI21 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf38Q8BI21 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf38Q8BI21 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.27□□□□□ -0.12
Rnf38Q8BI21 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.12
Rnf38Q8BI21 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf38Q8BI21 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf38Q8BI21 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf38Q8BI21 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Rnf38Q8BI21 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf38Q8BI21 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf38Q8BI21 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf38Q8BI21 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf38Q8BI21 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Rnf38Q8BI21 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.27□□□□□ -0.12
Rnf38Q8BI21 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf38Q8BI21 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf38Q8BI21 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.27□□□□□ -0.13
Rnf38Q8BI21 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.27□□□□□ -0.13
Rnf38Q8BI21 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.27□□□□□ -0.13
Rnf38Q8BI21 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Rnf38Q8BI21 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf38Q8BI21 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.27□□□□□ -0.13
Rnf38Q8BI21 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.27□□□□□ -0.13
Rnf38Q8BI21 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.27□□□□□ -0.13
Rnf38Q8BI21 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Rnf38Q8BI21 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf38Q8BI21 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf38Q8BI21 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf38Q8BI21 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf38Q8BI21 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms