Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Samm50Q8BGH2 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Samm50Q8BGH2 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Samm50Q8BGH2 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Samm50Q8BGH2 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Samm50Q8BGH2 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Samm50Q8BGH2 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Samm50Q8BGH2 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Samm50Q8BGH2 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Samm50Q8BGH2 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Samm50Q8BGH2 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC17.36■□□□□ 0.37
Samm50Q8BGH2 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Samm50Q8BGH2 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
Samm50Q8BGH2 Gm18489-201ENSMUST00000172565 551 ntBASIC17.36■□□□□ 0.37
Samm50Q8BGH2 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC17.36■□□□□ 0.37
Samm50Q8BGH2 Gm9682-201ENSMUST00000197505 556 ntBASIC17.36■□□□□ 0.37
Samm50Q8BGH2 AC084391.1-201ENSMUST00000200651 141 ntBASIC17.36■□□□□ 0.37
Samm50Q8BGH2 Gm42670-201ENSMUST00000201816 1292 ntBASIC17.36■□□□□ 0.37
Samm50Q8BGH2 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC17.36■□□□□ 0.37
Samm50Q8BGH2 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC17.36■□□□□ 0.37
Samm50Q8BGH2 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Samm50Q8BGH2 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Samm50Q8BGH2 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Samm50Q8BGH2 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Samm50Q8BGH2 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Samm50Q8BGH2 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Samm50Q8BGH2 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Samm50Q8BGH2 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Samm50Q8BGH2 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.35■□□□□ 0.37
Samm50Q8BGH2 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Samm50Q8BGH2 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Samm50Q8BGH2 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Samm50Q8BGH2 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Samm50Q8BGH2 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Samm50Q8BGH2 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Samm50Q8BGH2 Gm42632-201ENSMUST00000201707 2411 ntBASIC17.35■□□□□ 0.37
Samm50Q8BGH2 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Samm50Q8BGH2 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Samm50Q8BGH2 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Samm50Q8BGH2 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC17.35■□□□□ 0.37
Samm50Q8BGH2 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC17.35■□□□□ 0.37
Samm50Q8BGH2 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC17.35■□□□□ 0.37
Samm50Q8BGH2 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Samm50Q8BGH2 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC17.35■□□□□ 0.37
Samm50Q8BGH2 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC17.35■□□□□ 0.37
Samm50Q8BGH2 Gm8000-201ENSMUST00000188378 592 ntBASIC17.35■□□□□ 0.37
Samm50Q8BGH2 Gm5712-201ENSMUST00000199748 1043 ntBASIC17.35■□□□□ 0.37
Samm50Q8BGH2 Gm7556-201ENSMUST00000201178 1084 ntBASIC17.35■□□□□ 0.37
Samm50Q8BGH2 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Samm50Q8BGH2 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Samm50Q8BGH2 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC17.35■□□□□ 0.37
Samm50Q8BGH2 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Samm50Q8BGH2 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Samm50Q8BGH2 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Samm50Q8BGH2 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC17.35■□□□□ 0.37
Samm50Q8BGH2 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Samm50Q8BGH2 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Samm50Q8BGH2 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Samm50Q8BGH2 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Samm50Q8BGH2 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Samm50Q8BGH2 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Samm50Q8BGH2 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Samm50Q8BGH2 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Samm50Q8BGH2 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Samm50Q8BGH2 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Samm50Q8BGH2 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Samm50Q8BGH2 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Samm50Q8BGH2 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Samm50Q8BGH2 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Samm50Q8BGH2 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC17.34■□□□□ 0.37
Samm50Q8BGH2 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Samm50Q8BGH2 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Samm50Q8BGH2 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC17.34■□□□□ 0.37
Samm50Q8BGH2 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Samm50Q8BGH2 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Samm50Q8BGH2 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Samm50Q8BGH2 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Samm50Q8BGH2 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Samm50Q8BGH2 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Samm50Q8BGH2 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Samm50Q8BGH2 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Samm50Q8BGH2 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Samm50Q8BGH2 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Samm50Q8BGH2 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
Samm50Q8BGH2 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Samm50Q8BGH2 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Samm50Q8BGH2 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Samm50Q8BGH2 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Samm50Q8BGH2 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Samm50Q8BGH2 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Samm50Q8BGH2 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Samm50Q8BGH2 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC17.33■□□□□ 0.37
Samm50Q8BGH2 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.37
Samm50Q8BGH2 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC17.33■□□□□ 0.37
Samm50Q8BGH2 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Samm50Q8BGH2 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Samm50Q8BGH2 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Samm50Q8BGH2 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC17.33■□□□□ 0.37
Samm50Q8BGH2 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC17.33■□□□□ 0.37
Samm50Q8BGH2 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms