Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trim36Q80WG7 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim36Q80WG7 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim36Q80WG7 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim36Q80WG7 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.3□□□□□ -0.12
Trim36Q80WG7 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim36Q80WG7 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim36Q80WG7 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim36Q80WG7 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim36Q80WG7 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Trim36Q80WG7 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.3□□□□□ -0.12
Trim36Q80WG7 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.3□□□□□ -0.12
Trim36Q80WG7 Gm6550-201ENSMUST00000187574 993 ntBASIC14.3□□□□□ -0.12
Trim36Q80WG7 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
Trim36Q80WG7 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.3□□□□□ -0.12
Trim36Q80WG7 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.3□□□□□ -0.12
Trim36Q80WG7 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim36Q80WG7 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim36Q80WG7 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trim36Q80WG7 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim36Q80WG7 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Trim36Q80WG7 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim36Q80WG7 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim36Q80WG7 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim36Q80WG7 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim36Q80WG7 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim36Q80WG7 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim36Q80WG7 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim36Q80WG7 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trim36Q80WG7 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trim36Q80WG7 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim36Q80WG7 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim36Q80WG7 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim36Q80WG7 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim36Q80WG7 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim36Q80WG7 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim36Q80WG7 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim36Q80WG7 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim36Q80WG7 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.29□□□□□ -0.12
Trim36Q80WG7 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim36Q80WG7 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim36Q80WG7 AV026068-213ENSMUST00000223675 1171 ntBASIC14.29□□□□□ -0.12
Trim36Q80WG7 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trim36Q80WG7 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim36Q80WG7 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim36Q80WG7 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim36Q80WG7 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.29□□□□□ -0.12
Trim36Q80WG7 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim36Q80WG7 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim36Q80WG7 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim36Q80WG7 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim36Q80WG7 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim36Q80WG7 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim36Q80WG7 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim36Q80WG7 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim36Q80WG7 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.28□□□□□ -0.12
Trim36Q80WG7 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trim36Q80WG7 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim36Q80WG7 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trim36Q80WG7 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim36Q80WG7 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim36Q80WG7 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim36Q80WG7 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trim36Q80WG7 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim36Q80WG7 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim36Q80WG7 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim36Q80WG7 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.28□□□□□ -0.12
Trim36Q80WG7 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.28□□□□□ -0.12
Trim36Q80WG7 Gm19164-201ENSMUST00000210667 640 ntBASIC14.28□□□□□ -0.12
Trim36Q80WG7 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.28□□□□□ -0.12
Trim36Q80WG7 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.28□□□□□ -0.12
Trim36Q80WG7 Psmb5-202ENSMUST00000227257 622 ntBASIC14.28□□□□□ -0.12
Trim36Q80WG7 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim36Q80WG7 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim36Q80WG7 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trim36Q80WG7 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim36Q80WG7 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim36Q80WG7 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Trim36Q80WG7 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trim36Q80WG7 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim36Q80WG7 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim36Q80WG7 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.28□□□□□ -0.12
Trim36Q80WG7 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim36Q80WG7 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim36Q80WG7 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim36Q80WG7 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Trim36Q80WG7 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim36Q80WG7 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim36Q80WG7 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trim36Q80WG7 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trim36Q80WG7 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trim36Q80WG7 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trim36Q80WG7 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.27□□□□□ -0.12
Trim36Q80WG7 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim36Q80WG7 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.27□□□□□ -0.12
Trim36Q80WG7 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim36Q80WG7 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trim36Q80WG7 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim36Q80WG7 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.27□□□□□ -0.13
Trim36Q80WG7 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms