Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trim62Q80V85 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.29■□□□□ 0.04
Trim62Q80V85 Chchd1-203ENSMUST00000224633 557 ntBASIC15.29■□□□□ 0.04
Trim62Q80V85 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC15.29■□□□□ 0.04
Trim62Q80V85 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim62Q80V85 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim62Q80V85 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim62Q80V85 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim62Q80V85 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim62Q80V85 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trim62Q80V85 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC15.29■□□□□ 0.04
Trim62Q80V85 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim62Q80V85 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim62Q80V85 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim62Q80V85 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trim62Q80V85 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim62Q80V85 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim62Q80V85 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim62Q80V85 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim62Q80V85 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trim62Q80V85 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Trim62Q80V85 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim62Q80V85 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC15.28■□□□□ 0.04
Trim62Q80V85 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim62Q80V85 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC15.28■□□□□ 0.04
Trim62Q80V85 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim62Q80V85 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim62Q80V85 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim62Q80V85 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim62Q80V85 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim62Q80V85 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.28■□□□□ 0.04
Trim62Q80V85 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.28■□□□□ 0.04
Trim62Q80V85 Gm15483-201ENSMUST00000120338 456 ntBASIC15.28■□□□□ 0.04
Trim62Q80V85 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim62Q80V85 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim62Q80V85 Gm4691-201ENSMUST00000182339 1000 ntBASIC15.28■□□□□ 0.04
Trim62Q80V85 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trim62Q80V85 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trim62Q80V85 Gm2451-201ENSMUST00000199447 999 ntBASIC15.28■□□□□ 0.04
Trim62Q80V85 Gm10290-201ENSMUST00000200451 999 ntBASIC15.28■□□□□ 0.04
Trim62Q80V85 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15.28■□□□□ 0.04
Trim62Q80V85 Gm45098-201ENSMUST00000207179 657 ntBASIC15.28■□□□□ 0.04
Trim62Q80V85 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC15.28■□□□□ 0.04
Trim62Q80V85 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim62Q80V85 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim62Q80V85 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim62Q80V85 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim62Q80V85 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim62Q80V85 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim62Q80V85 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim62Q80V85 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Trim62Q80V85 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim62Q80V85 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim62Q80V85 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim62Q80V85 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trim62Q80V85 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim62Q80V85 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim62Q80V85 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim62Q80V85 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
Trim62Q80V85 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim62Q80V85 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trim62Q80V85 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Trim62Q80V85 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Trim62Q80V85 Gm25287-201ENSMUST00000103846 110 ntBASIC15.27■□□□□ 0.04
Trim62Q80V85 Gm22918-201ENSMUST00000103855 110 ntBASIC15.27■□□□□ 0.04
Trim62Q80V85 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC15.27■□□□□ 0.04
Trim62Q80V85 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.27■□□□□ 0.04
Trim62Q80V85 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.27■□□□□ 0.04
Trim62Q80V85 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trim62Q80V85 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC15.27■□□□□ 0.04
Trim62Q80V85 Gm26308-201ENSMUST00000157768 69 ntBASIC15.27■□□□□ 0.04
Trim62Q80V85 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC15.27■□□□□ 0.04
Trim62Q80V85 Gm43575-201ENSMUST00000196420 516 ntBASIC15.27■□□□□ 0.04
Trim62Q80V85 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC15.27■□□□□ 0.04
Trim62Q80V85 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim62Q80V85 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim62Q80V85 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Trim62Q80V85 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trim62Q80V85 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Trim62Q80V85 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Trim62Q80V85 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim62Q80V85 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim62Q80V85 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim62Q80V85 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim62Q80V85 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.03
Trim62Q80V85 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.27■□□□□ 0.03
Trim62Q80V85 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim62Q80V85 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Trim62Q80V85 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim62Q80V85 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim62Q80V85 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim62Q80V85 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim62Q80V85 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim62Q80V85 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim62Q80V85 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim62Q80V85 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trim62Q80V85 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Trim62Q80V85 Gm13365-201ENSMUST00000121188 973 ntBASIC15.26■□□□□ 0.03
Trim62Q80V85 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim62Q80V85 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms