Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.51□□□□□ -0.09
Pcdh19Q80TF3 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh19Q80TF3 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh19Q80TF3 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh19Q80TF3 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh19Q80TF3 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh19Q80TF3 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh19Q80TF3 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh19Q80TF3 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh19Q80TF3 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh19Q80TF3 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh19Q80TF3 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh19Q80TF3 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.51□□□□□ -0.09
Pcdh19Q80TF3 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh19Q80TF3 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh19Q80TF3 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
Pcdh19Q80TF3 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh19Q80TF3 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh19Q80TF3 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh19Q80TF3 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh19Q80TF3 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh19Q80TF3 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.5□□□□□ -0.09
Pcdh19Q80TF3 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh19Q80TF3 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh19Q80TF3 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh19Q80TF3 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh19Q80TF3 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh19Q80TF3 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Pcdh19Q80TF3 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.5□□□□□ -0.09
Pcdh19Q80TF3 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Pcdh19Q80TF3 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh19Q80TF3 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.5□□□□□ -0.09
Pcdh19Q80TF3 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh19Q80TF3 AC153937.1-201ENSMUST00000218734 412 ntBASIC14.5□□□□□ -0.09
Pcdh19Q80TF3 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.5□□□□□ -0.09
Pcdh19Q80TF3 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh19Q80TF3 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh19Q80TF3 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh19Q80TF3 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh19Q80TF3 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh19Q80TF3 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Pcdh19Q80TF3 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh19Q80TF3 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh19Q80TF3 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh19Q80TF3 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh19Q80TF3 Asic1-205ENSMUST00000228185 1818 ntBASIC14.5□□□□□ -0.09
Pcdh19Q80TF3 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh19Q80TF3 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh19Q80TF3 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh19Q80TF3 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Pcdh19Q80TF3 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh19Q80TF3 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh19Q80TF3 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh19Q80TF3 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh19Q80TF3 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh19Q80TF3 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh19Q80TF3 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.49□□□□□ -0.09
Pcdh19Q80TF3 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh19Q80TF3 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh19Q80TF3 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Pcdh19Q80TF3 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Pcdh19Q80TF3 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh19Q80TF3 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh19Q80TF3 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Pcdh19Q80TF3 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh19Q80TF3 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh19Q80TF3 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh19Q80TF3 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh19Q80TF3 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh19Q80TF3 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Pcdh19Q80TF3 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh19Q80TF3 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Pcdh19Q80TF3 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh19Q80TF3 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh19Q80TF3 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh19Q80TF3 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh19Q80TF3 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh19Q80TF3 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh19Q80TF3 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh19Q80TF3 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh19Q80TF3 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh19Q80TF3 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
Pcdh19Q80TF3 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh19Q80TF3 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh19Q80TF3 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh19Q80TF3 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh19Q80TF3 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh19Q80TF3 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh19Q80TF3 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh19Q80TF3 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Pcdh19Q80TF3 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh19Q80TF3 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.48□□□□□ -0.09
Pcdh19Q80TF3 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh19Q80TF3 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh19Q80TF3 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.48□□□□□ -0.09
Pcdh19Q80TF3 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Pcdh19Q80TF3 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
Pcdh19Q80TF3 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
Pcdh19Q80TF3 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.48□□□□□ -0.09
Pcdh19Q80TF3 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms