Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pif1Q80SX8 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pif1Q80SX8 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.66□□□□□ -0.22
Pif1Q80SX8 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pif1Q80SX8 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pif1Q80SX8 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pif1Q80SX8 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pif1Q80SX8 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pif1Q80SX8 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Pif1Q80SX8 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Pif1Q80SX8 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pif1Q80SX8 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pif1Q80SX8 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pif1Q80SX8 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pif1Q80SX8 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.66□□□□□ -0.22
Pif1Q80SX8 Gm5866-201ENSMUST00000177881 973 ntBASIC13.66□□□□□ -0.22
Pif1Q80SX8 Gm27989-201ENSMUST00000184721 107 ntBASIC13.66□□□□□ -0.22
Pif1Q80SX8 Gm38294-201ENSMUST00000192831 381 ntBASIC13.66□□□□□ -0.22
Pif1Q80SX8 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.66□□□□□ -0.22
Pif1Q80SX8 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.66□□□□□ -0.22
Pif1Q80SX8 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.66□□□□□ -0.22
Pif1Q80SX8 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pif1Q80SX8 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pif1Q80SX8 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pif1Q80SX8 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pif1Q80SX8 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pif1Q80SX8 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Pif1Q80SX8 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pif1Q80SX8 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.66□□□□□ -0.22
Pif1Q80SX8 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Pif1Q80SX8 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pif1Q80SX8 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pif1Q80SX8 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pif1Q80SX8 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Pif1Q80SX8 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pif1Q80SX8 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pif1Q80SX8 Gm44616-201ENSMUST00000206417 1732 ntBASIC13.65□□□□□ -0.22
Pif1Q80SX8 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pif1Q80SX8 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Pif1Q80SX8 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Pif1Q80SX8 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.65□□□□□ -0.22
Pif1Q80SX8 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pif1Q80SX8 Gm23547-201ENSMUST00000158210 271 ntBASIC13.65□□□□□ -0.22
Pif1Q80SX8 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pif1Q80SX8 Gm27306-201ENSMUST00000183970 107 ntBASIC13.65□□□□□ -0.22
Pif1Q80SX8 Mir8102-201ENSMUST00000184148 139 ntBASIC13.65□□□□□ -0.22
Pif1Q80SX8 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pif1Q80SX8 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pif1Q80SX8 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pif1Q80SX8 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pif1Q80SX8 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pif1Q80SX8 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Pif1Q80SX8 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Pif1Q80SX8 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pif1Q80SX8 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pif1Q80SX8 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pif1Q80SX8 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pif1Q80SX8 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pif1Q80SX8 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pif1Q80SX8 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pif1Q80SX8 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pif1Q80SX8 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pif1Q80SX8 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pif1Q80SX8 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pif1Q80SX8 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.23
Pif1Q80SX8 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Pif1Q80SX8 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.64□□□□□ -0.23
Pif1Q80SX8 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pif1Q80SX8 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pif1Q80SX8 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pif1Q80SX8 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pif1Q80SX8 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pif1Q80SX8 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pif1Q80SX8 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pif1Q80SX8 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pif1Q80SX8 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pif1Q80SX8 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Pif1Q80SX8 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pif1Q80SX8 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pif1Q80SX8 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pif1Q80SX8 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pif1Q80SX8 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Pif1Q80SX8 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Pif1Q80SX8 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.64□□□□□ -0.23
Pif1Q80SX8 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pif1Q80SX8 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pif1Q80SX8 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.64□□□□□ -0.23
Pif1Q80SX8 Gm13453-201ENSMUST00000118708 357 ntBASIC13.64□□□□□ -0.23
Pif1Q80SX8 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.64□□□□□ -0.23
Pif1Q80SX8 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pif1Q80SX8 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.64□□□□□ -0.23
Pif1Q80SX8 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.64□□□□□ -0.23
Pif1Q80SX8 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pif1Q80SX8 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pif1Q80SX8 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.64□□□□□ -0.23
Pif1Q80SX8 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.64□□□□□ -0.23
Pif1Q80SX8 Gm6888-201ENSMUST00000221983 706 ntBASIC13.64□□□□□ -0.23
Pif1Q80SX8 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pif1Q80SX8 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pif1Q80SX8 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms