Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Npc1l1Q6T3U4 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Npc1l1Q6T3U4 AC154412.1-201ENSMUST00000226540 2786 ntBASIC17.69■□□□□ 0.42
Npc1l1Q6T3U4 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Npc1l1Q6T3U4 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Npc1l1Q6T3U4 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Npc1l1Q6T3U4 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Npc1l1Q6T3U4 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Npc1l1Q6T3U4 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Npc1l1Q6T3U4 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Npc1l1Q6T3U4 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC17.69■□□□□ 0.42
Npc1l1Q6T3U4 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Npc1l1Q6T3U4 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Npc1l1Q6T3U4 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Npc1l1Q6T3U4 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Npc1l1Q6T3U4 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Npc1l1Q6T3U4 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Npc1l1Q6T3U4 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Npc1l1Q6T3U4 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Npc1l1Q6T3U4 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Npc1l1Q6T3U4 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Npc1l1Q6T3U4 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Npc1l1Q6T3U4 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Npc1l1Q6T3U4 Gm6944-201ENSMUST00000182449 1006 ntBASIC17.69■□□□□ 0.42
Npc1l1Q6T3U4 Arhgef33-209ENSMUST00000225223 714 ntBASIC17.69■□□□□ 0.42
Npc1l1Q6T3U4 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Npc1l1Q6T3U4 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Npc1l1Q6T3U4 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Npc1l1Q6T3U4 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC17.69■□□□□ 0.42
Npc1l1Q6T3U4 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Npc1l1Q6T3U4 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Npc1l1Q6T3U4 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Npc1l1Q6T3U4 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC17.68■□□□□ 0.42
Npc1l1Q6T3U4 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Npc1l1Q6T3U4 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Npc1l1Q6T3U4 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Npc1l1Q6T3U4 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Npc1l1Q6T3U4 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Npc1l1Q6T3U4 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Npc1l1Q6T3U4 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Npc1l1Q6T3U4 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Npc1l1Q6T3U4 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Npc1l1Q6T3U4 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.68■□□□□ 0.42
Npc1l1Q6T3U4 Efs-202ENSMUST00000227037 2540 ntBASIC17.68■□□□□ 0.42
Npc1l1Q6T3U4 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC17.68■□□□□ 0.42
Npc1l1Q6T3U4 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Npc1l1Q6T3U4 Gm27306-201ENSMUST00000183970 107 ntBASIC17.68■□□□□ 0.42
Npc1l1Q6T3U4 Gm18049-201ENSMUST00000208909 581 ntBASIC17.68■□□□□ 0.42
Npc1l1Q6T3U4 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Npc1l1Q6T3U4 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Npc1l1Q6T3U4 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Npc1l1Q6T3U4 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Npc1l1Q6T3U4 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Npc1l1Q6T3U4 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC17.67■□□□□ 0.42
Npc1l1Q6T3U4 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Npc1l1Q6T3U4 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Npc1l1Q6T3U4 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Npc1l1Q6T3U4 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.67■□□□□ 0.42
Npc1l1Q6T3U4 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Npc1l1Q6T3U4 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Npc1l1Q6T3U4 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Npc1l1Q6T3U4 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Npc1l1Q6T3U4 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Npc1l1Q6T3U4 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Npc1l1Q6T3U4 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Npc1l1Q6T3U4 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Npc1l1Q6T3U4 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Npc1l1Q6T3U4 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Npc1l1Q6T3U4 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Npc1l1Q6T3U4 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Npc1l1Q6T3U4 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC17.67■□□□□ 0.42
Npc1l1Q6T3U4 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Npc1l1Q6T3U4 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Npc1l1Q6T3U4 Gm5866-201ENSMUST00000177881 973 ntBASIC17.67■□□□□ 0.42
Npc1l1Q6T3U4 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Npc1l1Q6T3U4 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Npc1l1Q6T3U4 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
Npc1l1Q6T3U4 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Npc1l1Q6T3U4 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Npc1l1Q6T3U4 Olfr286-202ENSMUST00000205305 969 ntBASIC17.67■□□□□ 0.42
Npc1l1Q6T3U4 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Npc1l1Q6T3U4 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
Npc1l1Q6T3U4 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Npc1l1Q6T3U4 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Npc1l1Q6T3U4 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Npc1l1Q6T3U4 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Npc1l1Q6T3U4 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Npc1l1Q6T3U4 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Npc1l1Q6T3U4 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
Npc1l1Q6T3U4 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Npc1l1Q6T3U4 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Npc1l1Q6T3U4 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC17.66■□□□□ 0.42
Npc1l1Q6T3U4 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Npc1l1Q6T3U4 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Npc1l1Q6T3U4 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Npc1l1Q6T3U4 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Npc1l1Q6T3U4 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Npc1l1Q6T3U4 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Npc1l1Q6T3U4 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Npc1l1Q6T3U4 Gm6539-201ENSMUST00000119157 1064 ntBASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms