Protein–RNA interactions for Protein: Q6IFX3

Krt40, Keratin, type I cytoskeletal 40, mousemouse

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt40Q6IFX3 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.34■□□□□ 0.37
Krt40Q6IFX3 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Krt40Q6IFX3 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Krt40Q6IFX3 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Krt40Q6IFX3 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Krt40Q6IFX3 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Krt40Q6IFX3 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Krt40Q6IFX3 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Krt40Q6IFX3 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Krt40Q6IFX3 Gm27989-201ENSMUST00000184721 107 ntBASIC17.34■□□□□ 0.37
Krt40Q6IFX3 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Krt40Q6IFX3 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC17.34■□□□□ 0.37
Krt40Q6IFX3 Gm9063-201ENSMUST00000223299 582 ntBASIC17.34■□□□□ 0.37
Krt40Q6IFX3 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Krt40Q6IFX3 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Krt40Q6IFX3 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Krt40Q6IFX3 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Krt40Q6IFX3 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Krt40Q6IFX3 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Krt40Q6IFX3 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC17.34■□□□□ 0.37
Krt40Q6IFX3 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Krt40Q6IFX3 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Krt40Q6IFX3 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Krt40Q6IFX3 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Krt40Q6IFX3 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Krt40Q6IFX3 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Krt40Q6IFX3 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Krt40Q6IFX3 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Krt40Q6IFX3 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.33■□□□□ 0.37
Krt40Q6IFX3 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Krt40Q6IFX3 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Krt40Q6IFX3 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Krt40Q6IFX3 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Krt40Q6IFX3 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Krt40Q6IFX3 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Krt40Q6IFX3 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Krt40Q6IFX3 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Krt40Q6IFX3 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Krt40Q6IFX3 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC17.33■□□□□ 0.36
Krt40Q6IFX3 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC17.33■□□□□ 0.36
Krt40Q6IFX3 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC17.33■□□□□ 0.36
Krt40Q6IFX3 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Krt40Q6IFX3 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Krt40Q6IFX3 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Krt40Q6IFX3 Shd-206ENSMUST00000225145 998 ntBASIC17.33■□□□□ 0.36
Krt40Q6IFX3 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC17.33■□□□□ 0.36
Krt40Q6IFX3 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Krt40Q6IFX3 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Krt40Q6IFX3 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Krt40Q6IFX3 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Krt40Q6IFX3 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Krt40Q6IFX3 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Krt40Q6IFX3 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Krt40Q6IFX3 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Krt40Q6IFX3 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Krt40Q6IFX3 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.33■□□□□ 0.36
Krt40Q6IFX3 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Krt40Q6IFX3 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Krt40Q6IFX3 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Krt40Q6IFX3 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Krt40Q6IFX3 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Krt40Q6IFX3 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Krt40Q6IFX3 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Krt40Q6IFX3 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Krt40Q6IFX3 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Krt40Q6IFX3 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Krt40Q6IFX3 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Krt40Q6IFX3 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Krt40Q6IFX3 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Krt40Q6IFX3 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Krt40Q6IFX3 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Krt40Q6IFX3 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Krt40Q6IFX3 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Krt40Q6IFX3 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Krt40Q6IFX3 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Krt40Q6IFX3 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Krt40Q6IFX3 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Krt40Q6IFX3 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Krt40Q6IFX3 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Krt40Q6IFX3 Gm6222-201ENSMUST00000120787 396 ntBASIC17.32■□□□□ 0.36
Krt40Q6IFX3 Gm27631-201ENSMUST00000184163 466 ntBASIC17.32■□□□□ 0.36
Krt40Q6IFX3 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC17.32■□□□□ 0.36
Krt40Q6IFX3 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Krt40Q6IFX3 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Krt40Q6IFX3 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Krt40Q6IFX3 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Krt40Q6IFX3 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Krt40Q6IFX3 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Krt40Q6IFX3 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Krt40Q6IFX3 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Krt40Q6IFX3 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Krt40Q6IFX3 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Krt40Q6IFX3 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.32■□□□□ 0.36
Krt40Q6IFX3 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Krt40Q6IFX3 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC17.31■□□□□ 0.36
Krt40Q6IFX3 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Krt40Q6IFX3 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Krt40Q6IFX3 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Krt40Q6IFX3 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Krt40Q6IFX3 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms