Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Foxc1Q61572 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Foxc1Q61572 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Foxc1Q61572 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Foxc1Q61572 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Foxc1Q61572 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Foxc1Q61572 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Foxc1Q61572 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Foxc1Q61572 Gm29644-201ENSMUST00000189003 1341 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Foxc1Q61572 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC10.95□□□□□ -0.66
Foxc1Q61572 Gm25509-201ENSMUST00000116985 106 ntBASIC10.95□□□□□ -0.66
Foxc1Q61572 Gm14494-201ENSMUST00000118786 435 ntBASIC10.95□□□□□ -0.66
Foxc1Q61572 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Foxc1Q61572 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC10.95□□□□□ -0.66
Foxc1Q61572 Gm9727-201ENSMUST00000161387 555 ntBASIC10.95□□□□□ -0.66
Foxc1Q61572 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Foxc1Q61572 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Foxc1Q61572 Gm27628-201ENSMUST00000184911 107 ntBASIC10.95□□□□□ -0.66
Foxc1Q61572 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC10.95□□□□□ -0.66
Foxc1Q61572 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Foxc1Q61572 Gm43575-201ENSMUST00000196420 516 ntBASIC10.95□□□□□ -0.66
Foxc1Q61572 Gm9682-201ENSMUST00000197505 556 ntBASIC10.95□□□□□ -0.66
Foxc1Q61572 AC084391.1-201ENSMUST00000200651 141 ntBASIC10.95□□□□□ -0.66
Foxc1Q61572 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Foxc1Q61572 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC10.95□□□□□ -0.66
Foxc1Q61572 Gm45683-201ENSMUST00000210825 1247 ntBASIC10.95□□□□□ -0.66
Foxc1Q61572 Gm17917-201ENSMUST00000218561 953 ntBASIC10.95□□□□□ -0.66
Foxc1Q61572 Gm44291-201ENSMUST00000203102 2865 ntBASIC10.95□□□□□ -0.66
Foxc1Q61572 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Foxc1Q61572 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Foxc1Q61572 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC10.95□□□□□ -0.66
Foxc1Q61572 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Foxc1Q61572 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Foxc1Q61572 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Foxc1Q61572 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Foxc1Q61572 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC10.95□□□□□ -0.66
Foxc1Q61572 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Foxc1Q61572 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Foxc1Q61572 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Foxc1Q61572 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Foxc1Q61572 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC10.95□□□□□ -0.66
Foxc1Q61572 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Foxc1Q61572 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Foxc1Q61572 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Foxc1Q61572 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Foxc1Q61572 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Foxc1Q61572 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Foxc1Q61572 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Foxc1Q61572 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Foxc1Q61572 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Foxc1Q61572 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Foxc1Q61572 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Foxc1Q61572 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Foxc1Q61572 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Foxc1Q61572 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Foxc1Q61572 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Foxc1Q61572 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Foxc1Q61572 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC10.94□□□□□ -0.66
Foxc1Q61572 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Foxc1Q61572 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC10.94□□□□□ -0.66
Foxc1Q61572 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Foxc1Q61572 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Foxc1Q61572 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC10.94□□□□□ -0.66
Foxc1Q61572 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Foxc1Q61572 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Foxc1Q61572 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Foxc1Q61572 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Foxc1Q61572 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Foxc1Q61572 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Foxc1Q61572 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Foxc1Q61572 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Foxc1Q61572 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Foxc1Q61572 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Foxc1Q61572 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Foxc1Q61572 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Foxc1Q61572 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Foxc1Q61572 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Foxc1Q61572 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Foxc1Q61572 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Foxc1Q61572 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Foxc1Q61572 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Foxc1Q61572 Ccdc166-201ENSMUST00000182172 2584 ntBASIC10.94□□□□□ -0.66
Foxc1Q61572 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC10.94□□□□□ -0.66
Foxc1Q61572 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Foxc1Q61572 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Foxc1Q61572 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Foxc1Q61572 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Foxc1Q61572 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Foxc1Q61572 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Foxc1Q61572 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Foxc1Q61572 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC10.94□□□□□ -0.66
Foxc1Q61572 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Foxc1Q61572 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Foxc1Q61572 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC10.93□□□□□ -0.66
Foxc1Q61572 AC157650.3-201ENSMUST00000225058 1476 ntBASIC10.93□□□□□ -0.66
Foxc1Q61572 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Foxc1Q61572 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Foxc1Q61572 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Foxc1Q61572 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC10.93□□□□□ -0.66
Foxc1Q61572 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms