Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Six4Q61321 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.91□□□□□ -0.02
Six4Q61321 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Six4Q61321 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Six4Q61321 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Six4Q61321 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Six4Q61321 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Six4Q61321 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Six4Q61321 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Six4Q61321 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Six4Q61321 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Six4Q61321 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Six4Q61321 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Six4Q61321 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.91□□□□□ -0.02
Six4Q61321 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.91□□□□□ -0.02
Six4Q61321 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.91□□□□□ -0.02
Six4Q61321 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Six4Q61321 Gm9726-201ENSMUST00000180321 678 ntBASIC14.91□□□□□ -0.02
Six4Q61321 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Six4Q61321 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Six4Q61321 Gm27494-201ENSMUST00000184735 189 ntBASIC14.91□□□□□ -0.02
Six4Q61321 Gm37935-201ENSMUST00000192012 982 ntBASIC14.91□□□□□ -0.02
Six4Q61321 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.91□□□□□ -0.02
Six4Q61321 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.91□□□□□ -0.02
Six4Q61321 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Six4Q61321 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.91□□□□□ -0.02
Six4Q61321 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Six4Q61321 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Six4Q61321 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Six4Q61321 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.91□□□□□ -0.02
Six4Q61321 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Six4Q61321 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.91□□□□□ -0.02
Six4Q61321 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.91□□□□□ -0.02
Six4Q61321 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Six4Q61321 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Six4Q61321 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Six4Q61321 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Six4Q61321 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Six4Q61321 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Six4Q61321 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Six4Q61321 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
Six4Q61321 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Six4Q61321 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Six4Q61321 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Six4Q61321 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Six4Q61321 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Six4Q61321 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Six4Q61321 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Six4Q61321 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Six4Q61321 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Six4Q61321 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Six4Q61321 Gm13365-201ENSMUST00000121188 973 ntBASIC14.9□□□□□ -0.02
Six4Q61321 Gm27920-201ENSMUST00000183953 96 ntBASIC14.9□□□□□ -0.02
Six4Q61321 Gm27702-201ENSMUST00000184512 56 ntBASIC14.9□□□□□ -0.02
Six4Q61321 Gm2213-201ENSMUST00000197485 688 ntBASIC14.9□□□□□ -0.02
Six4Q61321 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Six4Q61321 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.9□□□□□ -0.02
Six4Q61321 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Six4Q61321 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.9□□□□□ -0.02
Six4Q61321 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.9□□□□□ -0.02
Six4Q61321 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
Six4Q61321 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Six4Q61321 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Six4Q61321 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Six4Q61321 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Six4Q61321 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Six4Q61321 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Six4Q61321 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.9□□□□□ -0.02
Six4Q61321 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Six4Q61321 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Six4Q61321 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Six4Q61321 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Six4Q61321 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Six4Q61321 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Six4Q61321 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Six4Q61321 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Six4Q61321 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Six4Q61321 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Six4Q61321 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Six4Q61321 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Six4Q61321 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Six4Q61321 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Six4Q61321 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Six4Q61321 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Six4Q61321 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Six4Q61321 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Six4Q61321 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Six4Q61321 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.89□□□□□ -0.03
Six4Q61321 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.89□□□□□ -0.03
Six4Q61321 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Six4Q61321 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Six4Q61321 Olfr286-202ENSMUST00000205305 969 ntBASIC14.89□□□□□ -0.03
Six4Q61321 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.89□□□□□ -0.03
Six4Q61321 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Six4Q61321 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Six4Q61321 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Six4Q61321 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Six4Q61321 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Six4Q61321 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Six4Q61321 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms