Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav2Q5R1I9 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC11.82□□□□□ -0.52
Trav2Q5R1I9 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav2Q5R1I9 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav2Q5R1I9 Gm24158-201ENSMUST00000175263 71 ntBASIC11.82□□□□□ -0.52
Trav2Q5R1I9 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC11.82□□□□□ -0.52
Trav2Q5R1I9 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav2Q5R1I9 Gm44872-201ENSMUST00000207864 420 ntBASIC11.82□□□□□ -0.52
Trav2Q5R1I9 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC11.82□□□□□ -0.52
Trav2Q5R1I9 AC140397.2-201ENSMUST00000224213 834 ntBASIC11.82□□□□□ -0.52
Trav2Q5R1I9 AC131710.1-201ENSMUST00000228336 990 ntBASIC11.82□□□□□ -0.52
Trav2Q5R1I9 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav2Q5R1I9 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Trav2Q5R1I9 Gm13233-201ENSMUST00000118760 1443 ntBASIC11.82□□□□□ -0.52
Trav2Q5R1I9 Gm13244-201ENSMUST00000118855 1446 ntBASIC11.82□□□□□ -0.52
Trav2Q5R1I9 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav2Q5R1I9 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav2Q5R1I9 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trav2Q5R1I9 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav2Q5R1I9 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav2Q5R1I9 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav2Q5R1I9 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav2Q5R1I9 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav2Q5R1I9 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav2Q5R1I9 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Trav2Q5R1I9 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav2Q5R1I9 Ccdc166-201ENSMUST00000182172 2584 ntBASIC11.81□□□□□ -0.52
Trav2Q5R1I9 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav2Q5R1I9 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav2Q5R1I9 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav2Q5R1I9 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav2Q5R1I9 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Trav2Q5R1I9 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav2Q5R1I9 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav2Q5R1I9 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trav2Q5R1I9 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav2Q5R1I9 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav2Q5R1I9 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav2Q5R1I9 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav2Q5R1I9 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav2Q5R1I9 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Trav2Q5R1I9 Gm25287-201ENSMUST00000103846 110 ntBASIC11.81□□□□□ -0.52
Trav2Q5R1I9 Gm22918-201ENSMUST00000103855 110 ntBASIC11.81□□□□□ -0.52
Trav2Q5R1I9 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC11.81□□□□□ -0.52
Trav2Q5R1I9 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC11.81□□□□□ -0.52
Trav2Q5R1I9 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav2Q5R1I9 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav2Q5R1I9 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav2Q5R1I9 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav2Q5R1I9 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC11.81□□□□□ -0.52
Trav2Q5R1I9 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav2Q5R1I9 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav2Q5R1I9 AC164567.1-201ENSMUST00000219185 960 ntBASIC11.81□□□□□ -0.52
Trav2Q5R1I9 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav2Q5R1I9 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav2Q5R1I9 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trav2Q5R1I9 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trav2Q5R1I9 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav2Q5R1I9 CT025610.1-201ENSMUST00000224552 1786 ntBASIC11.81□□□□□ -0.52
Trav2Q5R1I9 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav2Q5R1I9 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav2Q5R1I9 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trav2Q5R1I9 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav2Q5R1I9 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trav2Q5R1I9 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav2Q5R1I9 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav2Q5R1I9 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav2Q5R1I9 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav2Q5R1I9 Gm6018-201ENSMUST00000216090 1306 ntBASIC11.81□□□□□ -0.52
Trav2Q5R1I9 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav2Q5R1I9 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav2Q5R1I9 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trav2Q5R1I9 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav2Q5R1I9 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav2Q5R1I9 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav2Q5R1I9 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav2Q5R1I9 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav2Q5R1I9 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav2Q5R1I9 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav2Q5R1I9 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav2Q5R1I9 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav2Q5R1I9 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trav2Q5R1I9 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav2Q5R1I9 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav2Q5R1I9 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav2Q5R1I9 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC11.8□□□□□ -0.52
Trav2Q5R1I9 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav2Q5R1I9 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC11.8□□□□□ -0.52
Trav2Q5R1I9 Gm10253-201ENSMUST00000194270 940 ntBASIC11.8□□□□□ -0.52
Trav2Q5R1I9 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav2Q5R1I9 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav2Q5R1I9 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav2Q5R1I9 Mxra8os-201ENSMUST00000097740 687 ntBASIC11.8□□□□□ -0.52
Trav2Q5R1I9 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav2Q5R1I9 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav2Q5R1I9 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav2Q5R1I9 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav2Q5R1I9 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Trav2Q5R1I9 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav2Q5R1I9 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms