Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav7-2Q5R1I3 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav7-2Q5R1I3 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Trav7-2Q5R1I3 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav7-2Q5R1I3 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav7-2Q5R1I3 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav7-2Q5R1I3 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav7-2Q5R1I3 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav7-2Q5R1I3 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav7-2Q5R1I3 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Trav7-2Q5R1I3 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav7-2Q5R1I3 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav7-2Q5R1I3 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC11.05□□□□□ -0.64
Trav7-2Q5R1I3 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC11.05□□□□□ -0.64
Trav7-2Q5R1I3 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav7-2Q5R1I3 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC11.05□□□□□ -0.64
Trav7-2Q5R1I3 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav7-2Q5R1I3 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Trav7-2Q5R1I3 Gm27646-201ENSMUST00000183989 110 ntBASIC11.05□□□□□ -0.64
Trav7-2Q5R1I3 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Trav7-2Q5R1I3 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav7-2Q5R1I3 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC11.05□□□□□ -0.64
Trav7-2Q5R1I3 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav7-2Q5R1I3 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav7-2Q5R1I3 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Trav7-2Q5R1I3 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav7-2Q5R1I3 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav7-2Q5R1I3 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav7-2Q5R1I3 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav7-2Q5R1I3 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Trav7-2Q5R1I3 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav7-2Q5R1I3 Gm37019-201ENSMUST00000192133 2134 ntBASIC11.05□□□□□ -0.64
Trav7-2Q5R1I3 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav7-2Q5R1I3 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC11.05□□□□□ -0.64
Trav7-2Q5R1I3 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav7-2Q5R1I3 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav7-2Q5R1I3 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav7-2Q5R1I3 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav7-2Q5R1I3 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav7-2Q5R1I3 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav7-2Q5R1I3 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav7-2Q5R1I3 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav7-2Q5R1I3 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav7-2Q5R1I3 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav7-2Q5R1I3 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Trav7-2Q5R1I3 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav7-2Q5R1I3 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav7-2Q5R1I3 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav7-2Q5R1I3 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Trav7-2Q5R1I3 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav7-2Q5R1I3 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav7-2Q5R1I3 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Trav7-2Q5R1I3 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC11.04□□□□□ -0.64
Trav7-2Q5R1I3 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Trav7-2Q5R1I3 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav7-2Q5R1I3 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav7-2Q5R1I3 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav7-2Q5R1I3 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC11.04□□□□□ -0.64
Trav7-2Q5R1I3 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Trav7-2Q5R1I3 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav7-2Q5R1I3 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav7-2Q5R1I3 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav7-2Q5R1I3 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav7-2Q5R1I3 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav7-2Q5R1I3 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav7-2Q5R1I3 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav7-2Q5R1I3 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Trav7-2Q5R1I3 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav7-2Q5R1I3 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav7-2Q5R1I3 Gm45504-201ENSMUST00000211407 2107 ntBASIC11.03□□□□□ -0.64
Trav7-2Q5R1I3 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav7-2Q5R1I3 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav7-2Q5R1I3 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav7-2Q5R1I3 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav7-2Q5R1I3 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Trav7-2Q5R1I3 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav7-2Q5R1I3 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav7-2Q5R1I3 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav7-2Q5R1I3 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav7-2Q5R1I3 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav7-2Q5R1I3 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav7-2Q5R1I3 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav7-2Q5R1I3 Gm7230-201ENSMUST00000173026 815 ntBASIC11.03□□□□□ -0.64
Trav7-2Q5R1I3 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC11.03□□□□□ -0.64
Trav7-2Q5R1I3 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Trav7-2Q5R1I3 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav7-2Q5R1I3 Gm18195-201ENSMUST00000207604 706 ntBASIC11.03□□□□□ -0.64
Trav7-2Q5R1I3 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
Trav7-2Q5R1I3 AC122024.2-201ENSMUST00000220086 871 ntBASIC11.03□□□□□ -0.64
Trav7-2Q5R1I3 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav7-2Q5R1I3 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav7-2Q5R1I3 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav7-2Q5R1I3 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav7-2Q5R1I3 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav7-2Q5R1I3 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav7-2Q5R1I3 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav7-2Q5R1I3 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav7-2Q5R1I3 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav7-2Q5R1I3 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav7-2Q5R1I3 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 93.7 ms