Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prpf38aQ4FK66 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Prpf38aQ4FK66 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prpf38aQ4FK66 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Prpf38aQ4FK66 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Prpf38aQ4FK66 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prpf38aQ4FK66 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prpf38aQ4FK66 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Prpf38aQ4FK66 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Prpf38aQ4FK66 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Prpf38aQ4FK66 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prpf38aQ4FK66 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
Prpf38aQ4FK66 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prpf38aQ4FK66 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prpf38aQ4FK66 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Prpf38aQ4FK66 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Prpf38aQ4FK66 Gm17837-201ENSMUST00000186435 985 ntBASIC17.24■□□□□ 0.35
Prpf38aQ4FK66 Rbfox2-208ENSMUST00000227930 1218 ntBASIC17.24■□□□□ 0.35
Prpf38aQ4FK66 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prpf38aQ4FK66 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Prpf38aQ4FK66 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prpf38aQ4FK66 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Prpf38aQ4FK66 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC17.24■□□□□ 0.35
Prpf38aQ4FK66 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prpf38aQ4FK66 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC17.24■□□□□ 0.35
Prpf38aQ4FK66 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prpf38aQ4FK66 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prpf38aQ4FK66 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prpf38aQ4FK66 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf38aQ4FK66 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf38aQ4FK66 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf38aQ4FK66 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf38aQ4FK66 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
Prpf38aQ4FK66 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf38aQ4FK66 Sybu-209ENSMUST00000228639 4113 ntBASIC17.23■□□□□ 0.35
Prpf38aQ4FK66 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf38aQ4FK66 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf38aQ4FK66 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf38aQ4FK66 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Prpf38aQ4FK66 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Prpf38aQ4FK66 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf38aQ4FK66 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC17.23■□□□□ 0.35
Prpf38aQ4FK66 Gm13823-201ENSMUST00000119930 345 ntBASIC17.23■□□□□ 0.35
Prpf38aQ4FK66 Gm25144-201ENSMUST00000179561 110 ntBASIC17.23■□□□□ 0.35
Prpf38aQ4FK66 Gm25352-201ENSMUST00000179815 110 ntBASIC17.23■□□□□ 0.35
Prpf38aQ4FK66 Gm27306-201ENSMUST00000183970 107 ntBASIC17.23■□□□□ 0.35
Prpf38aQ4FK66 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf38aQ4FK66 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf38aQ4FK66 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC17.23■□□□□ 0.35
Prpf38aQ4FK66 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf38aQ4FK66 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf38aQ4FK66 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf38aQ4FK66 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf38aQ4FK66 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf38aQ4FK66 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Prpf38aQ4FK66 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf38aQ4FK66 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf38aQ4FK66 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf38aQ4FK66 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf38aQ4FK66 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Prpf38aQ4FK66 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Prpf38aQ4FK66 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Prpf38aQ4FK66 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC17.22■□□□□ 0.35
Prpf38aQ4FK66 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC17.22■□□□□ 0.35
Prpf38aQ4FK66 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Prpf38aQ4FK66 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Prpf38aQ4FK66 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Prpf38aQ4FK66 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC17.22■□□□□ 0.35
Prpf38aQ4FK66 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC17.22■□□□□ 0.35
Prpf38aQ4FK66 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Prpf38aQ4FK66 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Prpf38aQ4FK66 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Prpf38aQ4FK66 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Prpf38aQ4FK66 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Prpf38aQ4FK66 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Prpf38aQ4FK66 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Prpf38aQ4FK66 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Prpf38aQ4FK66 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Prpf38aQ4FK66 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC17.21■□□□□ 0.35
Prpf38aQ4FK66 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf38aQ4FK66 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Prpf38aQ4FK66 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf38aQ4FK66 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf38aQ4FK66 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf38aQ4FK66 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf38aQ4FK66 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC17.21■□□□□ 0.35
Prpf38aQ4FK66 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf38aQ4FK66 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf38aQ4FK66 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Prpf38aQ4FK66 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf38aQ4FK66 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf38aQ4FK66 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf38aQ4FK66 Gm13453-201ENSMUST00000118708 357 ntBASIC17.21■□□□□ 0.35
Prpf38aQ4FK66 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf38aQ4FK66 Gm9726-201ENSMUST00000180321 678 ntBASIC17.21■□□□□ 0.35
Prpf38aQ4FK66 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Prpf38aQ4FK66 Olfr286-202ENSMUST00000205305 969 ntBASIC17.21■□□□□ 0.35
Prpf38aQ4FK66 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC17.21■□□□□ 0.35
Prpf38aQ4FK66 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC17.21■□□□□ 0.35
Prpf38aQ4FK66 Gm6888-201ENSMUST00000221983 706 ntBASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms