Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxc4Q08624 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Hoxc4Q08624 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxc4Q08624 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxc4Q08624 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.17□□□□□ -0.14
Hoxc4Q08624 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxc4Q08624 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxc4Q08624 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxc4Q08624 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxc4Q08624 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxc4Q08624 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxc4Q08624 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc4Q08624 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc4Q08624 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Hoxc4Q08624 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc4Q08624 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc4Q08624 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc4Q08624 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Hoxc4Q08624 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc4Q08624 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc4Q08624 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc4Q08624 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc4Q08624 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Hoxc4Q08624 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc4Q08624 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc4Q08624 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc4Q08624 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Hoxc4Q08624 Gm45453-201ENSMUST00000211758 853 ntBASIC14.16□□□□□ -0.14
Hoxc4Q08624 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.16□□□□□ -0.14
Hoxc4Q08624 Shd-206ENSMUST00000225145 998 ntBASIC14.16□□□□□ -0.14
Hoxc4Q08624 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc4Q08624 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.16□□□□□ -0.14
Hoxc4Q08624 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.16□□□□□ -0.14
Hoxc4Q08624 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc4Q08624 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Hoxc4Q08624 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc4Q08624 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Hoxc4Q08624 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc4Q08624 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc4Q08624 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc4Q08624 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc4Q08624 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Hoxc4Q08624 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc4Q08624 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc4Q08624 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc4Q08624 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc4Q08624 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc4Q08624 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc4Q08624 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc4Q08624 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc4Q08624 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc4Q08624 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc4Q08624 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.15□□□□□ -0.14
Hoxc4Q08624 Gm7775-201ENSMUST00000218871 853 ntBASIC14.15□□□□□ -0.14
Hoxc4Q08624 Wdyhv1-203ENSMUST00000226889 394 ntBASIC14.15□□□□□ -0.14
Hoxc4Q08624 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc4Q08624 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc4Q08624 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc4Q08624 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.15□□□□□ -0.14
Hoxc4Q08624 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc4Q08624 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc4Q08624 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc4Q08624 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Hoxc4Q08624 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc4Q08624 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc4Q08624 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.15□□□□□ -0.14
Hoxc4Q08624 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc4Q08624 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc4Q08624 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Hoxc4Q08624 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Hoxc4Q08624 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc4Q08624 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc4Q08624 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc4Q08624 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Hoxc4Q08624 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Hoxc4Q08624 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc4Q08624 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc4Q08624 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc4Q08624 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc4Q08624 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Hoxc4Q08624 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Hoxc4Q08624 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14.14□□□□□ -0.15
Hoxc4Q08624 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.14□□□□□ -0.15
Hoxc4Q08624 AA619741-201ENSMUST00000195095 646 ntBASIC14.14□□□□□ -0.15
Hoxc4Q08624 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14.14□□□□□ -0.15
Hoxc4Q08624 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc4Q08624 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc4Q08624 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc4Q08624 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Hoxc4Q08624 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc4Q08624 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc4Q08624 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Hoxc4Q08624 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc4Q08624 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc4Q08624 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc4Q08624 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Hoxc4Q08624 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Hoxc4Q08624 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Hoxc4Q08624 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc4Q08624 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms