Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.54□□□□□ -0.08
Sox4Q06831 Gm18057-201ENSMUST00000208220 503 ntBASIC14.54□□□□□ -0.08
Sox4Q06831 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Sox4Q06831 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.54□□□□□ -0.08
Sox4Q06831 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox4Q06831 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.54□□□□□ -0.08
Sox4Q06831 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.54□□□□□ -0.08
Sox4Q06831 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox4Q06831 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox4Q06831 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox4Q06831 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox4Q06831 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox4Q06831 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Sox4Q06831 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox4Q06831 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox4Q06831 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Sox4Q06831 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox4Q06831 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.54□□□□□ -0.08
Sox4Q06831 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox4Q06831 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Sox4Q06831 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox4Q06831 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox4Q06831 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox4Q06831 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Sox4Q06831 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox4Q06831 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Sox4Q06831 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox4Q06831 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox4Q06831 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.53□□□□□ -0.08
Sox4Q06831 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox4Q06831 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox4Q06831 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.53□□□□□ -0.08
Sox4Q06831 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sox4Q06831 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox4Q06831 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox4Q06831 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Sox4Q06831 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Sox4Q06831 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sox4Q06831 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox4Q06831 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.53□□□□□ -0.08
Sox4Q06831 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.53□□□□□ -0.08
Sox4Q06831 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.53□□□□□ -0.08
Sox4Q06831 Gm18889-201ENSMUST00000174284 929 ntBASIC14.53□□□□□ -0.08
Sox4Q06831 Gm44335-201ENSMUST00000196879 141 ntBASIC14.53□□□□□ -0.08
Sox4Q06831 Gm44297-201ENSMUST00000198304 141 ntBASIC14.53□□□□□ -0.08
Sox4Q06831 Gm44346-201ENSMUST00000198851 141 ntBASIC14.53□□□□□ -0.08
Sox4Q06831 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.53□□□□□ -0.08
Sox4Q06831 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Sox4Q06831 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.53□□□□□ -0.08
Sox4Q06831 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.53□□□□□ -0.08
Sox4Q06831 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Sox4Q06831 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox4Q06831 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox4Q06831 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sox4Q06831 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox4Q06831 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox4Q06831 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox4Q06831 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox4Q06831 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Sox4Q06831 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sox4Q06831 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
Sox4Q06831 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox4Q06831 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox4Q06831 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Sox4Q06831 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.52□□□□□ -0.08
Sox4Q06831 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.52□□□□□ -0.08
Sox4Q06831 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sox4Q06831 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Sox4Q06831 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sox4Q06831 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sox4Q06831 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Sox4Q06831 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sox4Q06831 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
Sox4Q06831 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sox4Q06831 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.52□□□□□ -0.08
Sox4Q06831 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sox4Q06831 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Sox4Q06831 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Sox4Q06831 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.52□□□□□ -0.08
Sox4Q06831 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sox4Q06831 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Sox4Q06831 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.52□□□□□ -0.09
Sox4Q06831 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox4Q06831 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox4Q06831 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.52□□□□□ -0.09
Sox4Q06831 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.52□□□□□ -0.09
Sox4Q06831 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.52□□□□□ -0.09
Sox4Q06831 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.52□□□□□ -0.09
Sox4Q06831 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Sox4Q06831 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox4Q06831 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Sox4Q06831 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox4Q06831 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox4Q06831 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox4Q06831 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox4Q06831 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
Sox4Q06831 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.52□□□□□ -0.09
Sox4Q06831 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.52□□□□□ -0.09
Sox4Q06831 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox4Q06831 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms