Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm17795-201ENSMUST00000214505 757 ntBASIC9.9□□□□□ -0.83
PrkdcP97313 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
PrkdcP97313 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.83
PrkdcP97313 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
PrkdcP97313 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
PrkdcP97313 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
PrkdcP97313 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
PrkdcP97313 Gm43195-201ENSMUST00000200614 2332 ntBASIC9.9□□□□□ -0.83
PrkdcP97313 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
PrkdcP97313 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
PrkdcP97313 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
PrkdcP97313 Gm13461-201ENSMUST00000120980 662 ntBASIC9.89□□□□□ -0.83
PrkdcP97313 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
PrkdcP97313 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC9.89□□□□□ -0.83
PrkdcP97313 Gm5363-201ENSMUST00000211927 938 ntBASIC9.89□□□□□ -0.83
PrkdcP97313 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
PrkdcP97313 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
PrkdcP97313 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
PrkdcP97313 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
PrkdcP97313 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
PrkdcP97313 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
PrkdcP97313 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
PrkdcP97313 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
PrkdcP97313 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
PrkdcP97313 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
PrkdcP97313 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
PrkdcP97313 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
PrkdcP97313 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
PrkdcP97313 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
PrkdcP97313 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC9.89□□□□□ -0.83
PrkdcP97313 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
PrkdcP97313 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC9.89□□□□□ -0.83
PrkdcP97313 Gm18556-201ENSMUST00000219748 1031 ntBASIC9.89□□□□□ -0.83
PrkdcP97313 AC155237.1-201ENSMUST00000226196 1279 ntBASIC9.89□□□□□ -0.83
PrkdcP97313 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
PrkdcP97313 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
PrkdcP97313 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
PrkdcP97313 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
PrkdcP97313 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
PrkdcP97313 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
PrkdcP97313 Gm4909-201ENSMUST00000118749 794 ntBASIC9.88□□□□□ -0.83
PrkdcP97313 Gm26464-201ENSMUST00000157094 305 ntBASIC9.88□□□□□ -0.83
PrkdcP97313 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
PrkdcP97313 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
PrkdcP97313 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
PrkdcP97313 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
PrkdcP97313 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
PrkdcP97313 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
PrkdcP97313 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC9.88□□□□□ -0.83
PrkdcP97313 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
PrkdcP97313 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
PrkdcP97313 Gm27341-201ENSMUST00000183570 106 ntBASIC9.88□□□□□ -0.83
PrkdcP97313 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC9.88□□□□□ -0.83
PrkdcP97313 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
PrkdcP97313 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
PrkdcP97313 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
PrkdcP97313 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
PrkdcP97313 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
PrkdcP97313 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC9.88□□□□□ -0.83
PrkdcP97313 AC153526.5-201ENSMUST00000218661 2147 ntBASIC9.88□□□□□ -0.83
PrkdcP97313 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC9.88□□□□□ -0.83
PrkdcP97313 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
PrkdcP97313 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
PrkdcP97313 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
PrkdcP97313 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
PrkdcP97313 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
PrkdcP97313 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
PrkdcP97313 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
PrkdcP97313 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
PrkdcP97313 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
PrkdcP97313 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC9.88□□□□□ -0.83
PrkdcP97313 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
PrkdcP97313 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
PrkdcP97313 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
PrkdcP97313 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
PrkdcP97313 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
PrkdcP97313 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
PrkdcP97313 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC9.87□□□□□ -0.83
PrkdcP97313 Gm9431-201ENSMUST00000119765 1051 ntBASIC9.87□□□□□ -0.83
PrkdcP97313 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC9.87□□□□□ -0.83
PrkdcP97313 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC9.87□□□□□ -0.83
PrkdcP97313 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC9.87□□□□□ -0.83
PrkdcP97313 Gm20482-202ENSMUST00000174729 825 ntBASIC9.87□□□□□ -0.83
PrkdcP97313 Mir6979-201ENSMUST00000183927 56 ntBASIC9.87□□□□□ -0.83
PrkdcP97313 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
PrkdcP97313 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
PrkdcP97313 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
PrkdcP97313 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
PrkdcP97313 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
PrkdcP97313 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
PrkdcP97313 n-R5s14-201ENSMUST00000122688 107 ntBASIC9.87□□□□□ -0.83
PrkdcP97313 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
PrkdcP97313 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
PrkdcP97313 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
PrkdcP97313 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
PrkdcP97313 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC9.87□□□□□ -0.83
PrkdcP97313 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
PrkdcP97313 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
PrkdcP97313 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC9.87□□□□□ -0.83
PrkdcP97313 Gm6203-201ENSMUST00000209575 1342 ntBASIC9.87□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms