Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.84□□□□□ -0.19
Six5P70178 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Six5P70178 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Six5P70178 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Six5P70178 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
Six5P70178 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Six5P70178 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.84□□□□□ -0.19
Six5P70178 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Six5P70178 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Six5P70178 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
Six5P70178 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.84□□□□□ -0.19
Six5P70178 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Six5P70178 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Six5P70178 Gm17968-201ENSMUST00000194902 784 ntBASIC13.84□□□□□ -0.19
Six5P70178 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC13.84□□□□□ -0.19
Six5P70178 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Six5P70178 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Six5P70178 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Six5P70178 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Six5P70178 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Six5P70178 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Six5P70178 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
Six5P70178 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Six5P70178 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.84□□□□□ -0.19
Six5P70178 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Six5P70178 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.84□□□□□ -0.19
Six5P70178 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
Six5P70178 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Six5P70178 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
Six5P70178 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.83□□□□□ -0.19
Six5P70178 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Six5P70178 Gm14026-201ENSMUST00000120625 1789 ntBASIC13.83□□□□□ -0.19
Six5P70178 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Six5P70178 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Six5P70178 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Six5P70178 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Six5P70178 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Six5P70178 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Six5P70178 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Six5P70178 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Six5P70178 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Six5P70178 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Six5P70178 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Six5P70178 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
Six5P70178 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Six5P70178 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Six5P70178 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Six5P70178 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.83□□□□□ -0.2
Six5P70178 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.83□□□□□ -0.2
Six5P70178 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Six5P70178 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.83□□□□□ -0.2
Six5P70178 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.83□□□□□ -0.2
Six5P70178 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Six5P70178 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.83□□□□□ -0.2
Six5P70178 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Six5P70178 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Six5P70178 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.83□□□□□ -0.2
Six5P70178 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Six5P70178 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Six5P70178 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Six5P70178 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Six5P70178 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Six5P70178 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Six5P70178 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Six5P70178 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Six5P70178 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Six5P70178 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Six5P70178 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Six5P70178 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Six5P70178 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.83□□□□□ -0.2
Six5P70178 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Six5P70178 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Six5P70178 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Six5P70178 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Six5P70178 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Six5P70178 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Six5P70178 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Six5P70178 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Six5P70178 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Six5P70178 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Six5P70178 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Six5P70178 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Six5P70178 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Six5P70178 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Six5P70178 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Six5P70178 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Six5P70178 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Six5P70178 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Six5P70178 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Six5P70178 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Six5P70178 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Six5P70178 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Six5P70178 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Six5P70178 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Six5P70178 Gm15427-201ENSMUST00000117288 531 ntBASIC13.82□□□□□ -0.2
Six5P70178 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.82□□□□□ -0.2
Six5P70178 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC13.82□□□□□ -0.2
Six5P70178 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Six5P70178 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Six5P70178 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms