Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Nkx2-1P50220 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-1P50220 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-1P50220 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-1P50220 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-1P50220 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-1P50220 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-1P50220 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.28□□□□□ -0.44
Nkx2-1P50220 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-1P50220 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-1P50220 Grk6-207ENSMUST00000225925 2769 ntBASIC12.28□□□□□ -0.44
Nkx2-1P50220 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Nkx2-1P50220 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-1P50220 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-1P50220 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-1P50220 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-1P50220 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-1P50220 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-1P50220 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC12.28□□□□□ -0.44
Nkx2-1P50220 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-1P50220 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC12.28□□□□□ -0.44
Nkx2-1P50220 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-1P50220 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Nkx2-1P50220 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-1P50220 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-1P50220 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-1P50220 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-1P50220 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.28□□□□□ -0.44
Nkx2-1P50220 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Nkx2-1P50220 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Nkx2-1P50220 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-1P50220 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-1P50220 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-1P50220 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-1P50220 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-1P50220 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-1P50220 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Nkx2-1P50220 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Nkx2-1P50220 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-1P50220 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nkx2-1P50220 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nkx2-1P50220 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nkx2-1P50220 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nkx2-1P50220 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.27□□□□□ -0.44
Nkx2-1P50220 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Nkx2-1P50220 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nkx2-1P50220 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
Nkx2-1P50220 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nkx2-1P50220 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nkx2-1P50220 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nkx2-1P50220 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nkx2-1P50220 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx2-1P50220 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx2-1P50220 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx2-1P50220 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.27□□□□□ -0.45
Nkx2-1P50220 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx2-1P50220 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx2-1P50220 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC12.27□□□□□ -0.45
Nkx2-1P50220 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC12.27□□□□□ -0.45
Nkx2-1P50220 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx2-1P50220 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx2-1P50220 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx2-1P50220 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Nkx2-1P50220 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx2-1P50220 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx2-1P50220 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx2-1P50220 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx2-1P50220 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.27□□□□□ -0.45
Nkx2-1P50220 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx2-1P50220 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx2-1P50220 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx2-1P50220 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx2-1P50220 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Nkx2-1P50220 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx2-1P50220 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Nkx2-1P50220 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-1P50220 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-1P50220 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-1P50220 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-1P50220 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-1P50220 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-1P50220 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-1P50220 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.26□□□□□ -0.45
Nkx2-1P50220 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-1P50220 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-1P50220 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-1P50220 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-1P50220 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-1P50220 Gm13312-201ENSMUST00000119631 718 ntBASIC12.26□□□□□ -0.45
Nkx2-1P50220 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC12.26□□□□□ -0.45
Nkx2-1P50220 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC12.26□□□□□ -0.45
Nkx2-1P50220 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC12.26□□□□□ -0.45
Nkx2-1P50220 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.26□□□□□ -0.45
Nkx2-1P50220 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-1P50220 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.26□□□□□ -0.45
Nkx2-1P50220 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Nkx2-1P50220 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-1P50220 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-1P50220 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-1P50220 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms