Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx2-2P42586 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx2-2P42586 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx2-2P42586 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx2-2P42586 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx2-2P42586 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx2-2P42586 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.55□□□□□ -0.24
Nkx2-2P42586 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx2-2P42586 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.55□□□□□ -0.24
Nkx2-2P42586 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx2-2P42586 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx2-2P42586 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx2-2P42586 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx2-2P42586 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx2-2P42586 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.54□□□□□ -0.24
Nkx2-2P42586 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-2P42586 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-2P42586 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-2P42586 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-2P42586 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-2P42586 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-2P42586 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
Nkx2-2P42586 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-2P42586 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-2P42586 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Nkx2-2P42586 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-2P42586 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-2P42586 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Nkx2-2P42586 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Nkx2-2P42586 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Nkx2-2P42586 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Nkx2-2P42586 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-2P42586 Gm23547-201ENSMUST00000158210 271 ntBASIC13.54□□□□□ -0.24
Nkx2-2P42586 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-2P42586 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-2P42586 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-2P42586 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-2P42586 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-2P42586 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-2P42586 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-2P42586 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-2P42586 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-2P42586 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-2P42586 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Nkx2-2P42586 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-2P42586 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-2P42586 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Nkx2-2P42586 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-2P42586 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-2P42586 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-2P42586 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Nkx2-2P42586 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-2P42586 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-2P42586 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-2P42586 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.53□□□□□ -0.24
Nkx2-2P42586 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-2P42586 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-2P42586 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-2P42586 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-2P42586 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Nkx2-2P42586 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Nkx2-2P42586 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-2P42586 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.53□□□□□ -0.24
Nkx2-2P42586 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC13.53□□□□□ -0.24
Nkx2-2P42586 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC13.53□□□□□ -0.24
Nkx2-2P42586 Gm5712-201ENSMUST00000199748 1043 ntBASIC13.53□□□□□ -0.24
Nkx2-2P42586 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.53□□□□□ -0.24
Nkx2-2P42586 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.53□□□□□ -0.24
Nkx2-2P42586 Gm20553-201ENSMUST00000204205 844 ntBASIC13.53□□□□□ -0.24
Nkx2-2P42586 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.53□□□□□ -0.24
Nkx2-2P42586 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-2P42586 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-2P42586 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-2P42586 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-2P42586 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-2P42586 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-2P42586 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Nkx2-2P42586 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-2P42586 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-2P42586 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-2P42586 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.53□□□□□ -0.24
Nkx2-2P42586 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-2P42586 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-2P42586 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-2P42586 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-2P42586 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-2P42586 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-2P42586 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Nkx2-2P42586 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-2P42586 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Nkx2-2P42586 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-2P42586 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-2P42586 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-2P42586 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.52□□□□□ -0.24
Nkx2-2P42586 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.52□□□□□ -0.24
Nkx2-2P42586 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
Nkx2-2P42586 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Nkx2-2P42586 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Nkx2-2P42586 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Nkx2-2P42586 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms